MidgeBase gene description page [Pn.04073]
Outline
| Gene ID | Pn.04073 |
| Type | Protein coding gene |
| Scaffold | PnScaf3334 |
| Start | 39842 |
| End | 41643 |
| Direction | + |
Sequence
Transcript: 1200 (bp)
ATGAGTGCCTACGAGAACAATGAGGAGATACAGCTGTTCCGGGAATATCTACAGATTCCGAGCGTGCATCCAAACATCAACTACGAGCCGTGCATCGAATTTTTGAAGCGCCAAGCGAGCGACTTGAACCTCGACTACAAAGTCGAGTACCCGAAAAGTGCAAAGAAGCCTGTCTTCATTCTCACATGGCCTGGAACGCAGCCCGAATTGCCATCCATCATTCTGAACTCGCACATGGATGTCGTTCCGGTTTTCGAAGAGTTTTGGACGCACAAGCCCTTCTCGGCCGACATCGATGCCGAGGGAAAGATTTTCGCTCGAGGATCGCAGGACATGAAGTGCGTCGGCATGCAGTATCTCGCCGCCCTGAGACACTTCAGGAGAAACAACGTGCAGTTCAAGCGAACGATTCACGCGTGCTTTCTACCCGAGGAGGAAGTTGGTGGCGTGGAGGGCATGCGAGACTTCATCAACACCGAAGAATTCAAAAATCTAAACGCCGGATTTTCTCTCGACGAAGGCATCGCCAGCCCAGACGAAGTCTTCAACGTTTTCTACGCAGAGCGCTCGATTTGGCACGTTGAATTTGCAGTGCCCGGCAATCCGGGCCATGGCTCGCTTTTGCTAAAGAACACTGCTGGCGAGAAGCTCGAGCGCCTTCTCAATCGCTTCATCGAGTACCGCGACTCGCAGGTGAAGCGACTCGAAGACGATCCCAGTTTGCTGATCGGAGATGTGACGACTGTGAATGTCACGATGATTCACGGAGGCGTGCAATCGAACGTCATTCCACCGGAGTATAAGATGATGGTGGATATCCGACTGGCGCTCGATGTCGACCACGTTGAGTTCGAAAACATGTTCAAGAAGTGGTGCGAAGAGGCTGGCGAAGGAATCGCTTATTCCTTCGAACAAAAACAGCCGAAAGTCGCGGCCACAAAAACTGATGCCAGTAACCGTTACTTCACTGCGTTCAAGTCTGCTGTTGATGAGCTCGGACTCGACATCAAGCTCCAAGTTTTTCCGGGTGGCACTGACTCAAGGTACATCCGTGGAGTTGGAATTCCAGCAATTGGATTCAGTCCGATGAACCACACGCCCGTTTTGCTGCATGATCACGATGAGTTCTTGCGTGCTGACATTTACTTGAAGGGGATCGAAATTTACAAGAAGATTCTTGAAAAAGTTTGCAACCTGGAT
Protein: 400 (aa)
MSAYENNEEIQLFREYLQIPSVHPNINYEPCIEFLKRQASDLNLDYKVEYPKSAKKPVFILTWPGTQPELPSIILNSHMDVVPVFEEFWTHKPFSADIDAEGKIFARGSQDMKCVGMQYLAALRHFRRNNVQFKRTIHACFLPEEEVGGVEGMRDFINTEEFKNLNAGFSLDEGIASPDEVFNVFYAERSIWHVEFAVPGNPGHGSLLLKNTAGEKLERLLNRFIEYRDSQVKRLEDDPSLLIGDVTTVNVTMIHGGVQSNVIPPEYKMMVDIRLALDVDHVEFENMFKKWCEEAGEGIAYSFEQKQPKVAATKTDASNRYFTAFKSAVDELGLDIKLQVFPGGTDSRYIRGVGIPAIGFSPMNHTPVLLHDHDEFLRADIYLKGIEIYKKILEKVCNLD
| Type | Start | End | Length |
| CDS |
39842 |
39926 |
85 |
| CDS |
40394 |
41303 |
910 |
| CDS |
41372 |
41458 |
87 |
| CDS |
41523 |
41640 |
118 |
| intron |
39927 |
40393 |
467 |
| intron |
41304 |
41371 |
68 |
| intron |
41459 |
41522 |
64 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_002012859 |
GL23825 [Drosophila persimilis] gb|EDW23845.1| GL23825 [Drosophila persimilis] |
1e-153 |
| InterPro |
IPR002933 |
Peptidase M20 |
|
| InterPro |
IPR010159 |
N-acyl-L-amino-acid amidohydrolase |
|
| InterPro |
IPR011650 |
Peptidase M20, dimerisation |
|
| Gene Ontology(BP) |
GO:0008152 |
metabolic process |
|
| Gene Ontology(BP) |
GO:0006520 |
cellular amino acid metabolic process |
|
| Gene Ontology(CC) |
GO:0005737 |
cytoplasm |
|
| Gene Ontology(MF) |
GO:0016787 |
hydrolase activity |
|
| Gene Ontology(MF) |
GO:0004046 |
aminoacylase activity |
|
| Pfam |
PF01546.23 |
Peptidase family M20/M25/M40 |
2.4e-49 |
| Pfam |
PF07687.9 |
Peptidase dimerisation domain |
1.1e-12 |
| Pfam |
PF04389.12 |
Peptidase family M28 |
0.0095 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| H. sapiens |
ENSP00000419262 |
| D. plexippus |
DPOGS213685PA |
| P. vanderplanki |
Pv.10101 |
| H. sapiens |
ENSP00000390557 |
| H. melpomene |
HMEL010757-PA |
| P. humanus |
PHUM047660-PA |
| T. castaneum |
TC012529 |
| C. quinquefasciatus |
CPIJ013671 |
| D. melanogaster |
FBgn0037818 |
| H. sapiens |
ENSP00000384296 |
| P. vanderplanki |
Pv.10102 |
| H. sapiens |
ENSP00000420487 |
| N. vitripennis |
NV16582-PA |
| C. quinquefasciatus |
CPIJ013670 |
| M. musculus |
ENSMUSG00000023262 |
| T. castaneum |
TC012531 |
| A. mellifera |
GB12125-PA |
| A. gambiae |
AGAP000679 |
| T. castaneum |
TC012530 |
| D. melanogaster |
FBgn0039050 |
| D. plexippus |
DPOGS209240PA |
| D. melanogaster |
FBgn0039052 |
| S. invicta |
SI2.2.0_00964 |
| H. sapiens |
ENSP00000417056 |
| A. aegypti |
AAEL011206 |
| B. mori |
BGIBMGA010352-TA |
| D. melanogaster |
FBgn0039053 |
| C. quinquefasciatus |
CPIJ009804 |
| D. melanogaster |
FBgn0039049 |
| C. quinquefasciatus |
CPIJ013669 |
| D. melanogaster |
FBgn0039051 |