MidgeBase gene description page [Pn.04069]
Outline
| Gene ID | Pn.04069 |
| Type | Protein coding gene |
| Scaffold | PnScaf3334 |
| Start | 30819 |
| End | 32598 |
| Direction | - |
Sequence
Transcript: 1449 (bp)
ATGAATCGAGTGCGGTTGCAAAAATTTCGAAAAGCCATCAATCCTCACCTCCTCACAATATACACAGTTCTTGCGGTGGTTCTAGCGATTGTTCTTGGAATTGTTTTAAAAATGGACGATCGGAGCTACAGTCCAAGAACCGTCATGTATGTCAATTTTCTCGGAGATCTGTTCCTGCGGATGATCAGAGCGCTCATCCTGCCACTGATTGTTTCGTCCTTAATTGCCGCAATCGCTCCTCTCGACATTGGTCTATCGAAGAAGATAGGCACTCGCGCAATTATCTACATCCTTTCAACCACAGTGATTGCAGTCATCTTGGGAATTGTGCTGGTGATCACGATAAAACCCGGTGGTAGCTATGAAGATGACGGCTCGGTGGAGCAGAAAAAGTCAAGTACAATTGTCGACACTTTATTGGACTTGATAAGAAATATCTTTCCGCCGAACATCGTGCAAGCAACACTTCAAACTTATCAAACGACACTCACGGAACCCGAGGATGATCCTGATGCTAATGTGAAGGACTGGAAAATCGGCTACAGATACGCCGATGGAACAAACATGCTGGGCGTTGTGAGTGTGTCAATTATTTTCGGCCTCACAATGTCCATAATTCGTGAGAAGGTCAAGAGACTCATTGACCTCACGCTGGAGTTTGTCGAAGTGATGATGAAGCTCATCACCTTCGTCATCTGGCTGACGCCGATCGGTGTGTTCTTCTTGATCCTGGCCAAATTCCTCGAGATGGACGACATCCTCGATGTGTTTACAAAGCTGGGCATGTACTTGGTCACAGTATCGGCCGGCATCTTCATTCAAGGATTCATTTTCCTGCCTCTAATCTACTTCGCATTTACGAGGAAAAATCCTGTGCGATTCATTGTTCACATGGGTCCAGCGATTGTTACGGCACTTGGCACCAGCTCCTCAATGGCTACGCTTCCAGTATCGCTGAAATGTGTCGAGGAAAATGCAAAAATTGATGTGCGCGTGTCGAGGTTTATGCTTCCACTAGGAGCAACTATCAACATGAATGGTACCGCCCTCTATGAAGCTGTTGCTGCCATTTTCATCGCTCAACTGCGAGGAATTGATCTTTCTATTGGAAATGTTATTGCCGTGTGCATCACAGCAACTTGTGCTAGTATAGGCACCGCTGGAGTTCCTCAGGCAGGCTTAGTAACGCTTGTAATGGTGCTCGACAGCATCGGAATTCCTGCCGAGGACATTTCACTTATCATCGCCATAGATTGGTTTGTAAATCGAATTCGCGCGTGTGTAAACATCATGGGCGATGCATATGGAGCGGGAATCATTGAGGCTCTGAGCAGAAAAGAATTGGACAAAATACCGATTCAACCAAACGATATTGAAGCTTCAACTTTGAACGGCGATGCAATCGAGCCCAAAGATTTCAAGGAAGTTAATGACGCTCAGATCAGATTG
Protein: 483 (aa)
MNRVRLQKFRKAINPHLLTIYTVLAVVLAIVLGIVLKMDDRSYSPRTVMYVNFLGDLFLRMIRALILPLIVSSLIAAIAPLDIGLSKKIGTRAIIYILSTTVIAVILGIVLVITIKPGGSYEDDGSVEQKKSSTIVDTLLDLIRNIFPPNIVQATLQTYQTTLTEPEDDPDANVKDWKIGYRYADGTNMLGVVSVSIIFGLTMSIIREKVKRLIDLTLEFVEVMMKLITFVIWLTPIGVFFLILAKFLEMDDILDVFTKLGMYLVTVSAGIFIQGFIFLPLIYFAFTRKNPVRFIVHMGPAIVTALGTSSSMATLPVSLKCVEENAKIDVRVSRFMLPLGATINMNGTALYEAVAAIFIAQLRGIDLSIGNVIAVCITATCASIGTAGVPQAGLVTLVMVLDSIGIPAEDISLIIAIDWFVNRIRACVNIMGDAYGAGIIEALSRKELDKIPIQPNDIEASTLNGDAIEPKDFKEVNDAQIRL
| Type | Start | End | Length |
| CDS |
30822 |
31008 |
187 |
| CDS |
31070 |
31204 |
135 |
| CDS |
31263 |
31350 |
88 |
| CDS |
31411 |
32018 |
608 |
| CDS |
32168 |
32598 |
431 |
| intron |
31009 |
31069 |
61 |
| intron |
31205 |
31262 |
58 |
| intron |
31351 |
31410 |
60 |
| intron |
32019 |
32167 |
149 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
EFR22176 |
hypothetical protein AND_15667 [Anopheles darlingi] |
1e-147 |
| InterPro |
IPR001991 |
Sodium:dicarboxylate symporter |
|
| Gene Ontology(BP) |
GO:0006835 |
dicarboxylic acid transport |
|
| Gene Ontology(CC) |
GO:0016020 |
membrane |
|
| Gene Ontology(MF) |
GO:0017153 |
sodium:dicarboxylate symporter activity |
|
| Pfam |
PF00375.13 |
Sodium:dicarboxylate symporter family |
2.1e-127 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
| Gene ID |
| Pn.08804 |
| Pn.09516 |
Orthologous genes
| Species |
Gene ID |
| N. vitripennis |
NV50166-PA |
| M. musculus |
ENSMUSG00000008932 |
| M. musculus |
ENSMUSG00000005357 |
| P. vanderplanki |
Pv.08318 |
| H. sapiens |
ENSP00000446175 |
| H. sapiens |
ENSP00000360549 |
| H. sapiens |
ENSP00000371343 |
| C. quinquefasciatus |
CPIJ802224 |
| S. invicta |
SI2.2.0_04721 |
| H. melpomene |
HMEL011946-PA |
| H. sapiens |
ENSP00000408801 |
| A. aegypti |
AAEL004496 |
| A. gambiae |
AGAP006718 |
| C. quinquefasciatus |
CPIJ001134 |
| P. vanderplanki |
Pv.10105 |
| A. aegypti |
AAEL013109 |
| P. vanderplanki |
Pv.03232 |
| N. vitripennis |
NV18664-PA |
| A. mellifera |
GB16911-PA |
| H. sapiens |
ENSP00000221742 |
| T. castaneum |
TC008606 |
| H. sapiens |
ENSP00000265113 |
| A. mellifera |
GB13253-PA |
| M. musculus |
ENSMUSG00000024935 |
| D. melanogaster |
FBgn0026439 |
| A. gambiae |
AGAP009443 |
| H. sapiens |
ENSP00000409386 |
| T. castaneum |
TC003794 |
| H. sapiens |
ENSP00000262352 |
| D. plexippus |
DPOGS210424PA |
| C. quinquefasciatus |
CPIJ802223 |
| A. aegypti |
AAEL013111 |
| P. humanus |
PHUM537500-PA |