MidgeBase gene description page [Pn.04036]
Outline
| Gene ID | Pn.04036 |
| Type | Protein coding gene |
| Scaffold | PnScaf3332 |
| Start | 5641 |
| End | 31744 |
| Direction | + |
Sequence
Transcript: 7095 (bp)
ATGGCATCACAACCATCAGAGCACTTACAAAATGATACTGGTAATAATCAAGGAATAAAAGTGAACGAATATCAACAGCAGCAGCAGCAGGAGATTCTCACAAAGCTACAGAATGGTGGTCAAACGAACCAACCGCCTCCCGTTTCTGCAGTTACTAGTGATCAACAGCAGCAGCATGGAAAAGGCATGAAATCTCCTCCGAGTAACGGAAACAGTGGTCACACCAACCCAAACGAAATGATGCCAAACGTCCCCGGCTACCACCATCAGGACTCGTCGAGTTTGGGCATGCCTCCTCAGCAGCAGCAGCATCCCGGACAGCAGCACATGCATCACCATCCAAGTGCCGGCAACGAGAAAGATGACATACAGCAACAGCAACAACAGCAGCCACCTCATCATCAACAGCAACACCCGATGTATGGTCATCAGCCGATGCATCCGATGCACGCTCCGCAGCAGCATATGCCGGGACATCACTTGCCGATGCATCCGCACCAGCAAAGATACCCCCATCATCCACACGCTCCGCCACCAATGCAGCACCCGATGCATTCGCACGATCCGAGTCAACAGCAGCAGCAAATGGATCCGTATGCGCACTATCGCGGAATGATGGGACCGCGGCCGCCGCAGCGCTACGGACTGGCGCCTGCACCTGGTCCCCAAGGTCCGATGCCGAACAACGCTCAGAACGTCCCGGCAAACGCAGGCGGAGGCCAACAGGGTCCAACGCCGACGCTTAACTCACTACTACAATCACAGTCATCGCCATCACCTCAGCAATCGCCACAGAGCGGACCGCCGCCACACCGCTATGGACCGTACGATCCATACGCGCAGCCAGTGAATGCTGCTGCTGCCGCTGCCGCCGCCGCTGCTGCCTCGGCCCAACAAGGTCCACCTCCCCCCAACAGTGGATCGTCGTCGCCAATGCCGCCGACTCACACTCAGTCGCAGCCGCCGCCGCAGCAGCAGCAACAGCAGGGCTGGGCGCCGCCACCTCGTCCCTACAGCCCTCATCAGCAGTATCGAGGACCACCGCCACCAACGGGAAACTCGTCGAGAGGGCAGTCGCCGTATCCACCGCCGCCGACTTCTGGCGTTCAGAGTCCTGGTCCGTATCCCGGTCCGAATCAGCAGCAAGGAACTCAGCCACCACCTGGTCCACCACAACAATATCAGTATCCTCAGCGCTATCCGACGCCGCCAGGGCCGGGCGGCCAGCAACAATCAATGGGTCCGCAGAATCATCGACCACCATACTCACAATGGCCATCACCGGCTGCTAGTCCAGGTCCTCACTTAGGTCCGCCGCCACCATCGCAATCACCTCATGCGCCTCCTCAGAGTCCTGGACCACAGCAGCAGACGCCGCTGCAGCAGCACAGTGCTCCAAGTCCGTCCTCACAACAACAACCTCAGTCACCACATCAGTATTTAAATCGACCGAGTCAACCCTCAACACCGAGTGCAAACGACAATGAAATGATTGGGGTAAATCAAAAGAAAAAGAACAGCAGTGCAAAGAAGAAAACGAAGAAGCAACAAAAGCAGGAAGCAGCAGCTGCAGCAGCCGCCCAGAACAATTCCAATGAAAATTCTTCCAATCTGGCCGTGTCAAGTCAACAGCAGGCACCGCCATCGCAGCCACCGTCATCAAATAATGCTTCGCAACAGCCGGGCTCACAAATGAGGCCAATCTCATCGCCAAACAGCTCCTCGTCTGGTTCTCGATCGATGTCTCCCGCTGTAGTTGGACAACAAAATTTGCCGATGCCTCCGAGACCGTCGAGCAGTCATTCGCAAGGTATGTCGATGCCAAACCAGCAACAGCAGCAGCAAGGAAATCAAAGCCTCAACATTCCCAATTCCGCGAACCCACAAATGGAGGGCGCACAAATGCCCGGCGCTCCGCAAGGCATGCCGCAAGGATATGGCGGAGGGCCCAAAATGCCGCACGGCTCCTACAACATGTCCCCATATCCGCCGCAATCGCAGTATTCACAGGGAAGCTACTCGCCGCGATATCCCGGCTACGGACCATCCAGTCAGCACCATCCGCCGCCACCCAACAGCCCGAGCCAGTACCGGCCCATGCAGAACCACGTGAATCCCGCCGGACATCCGCAGTATCCTCCGCACGCGCCCTACCACCATCAAGTGTGGCCGCCGCCGCCACAAAACAGCGGCAACAATCCCGGTGCAATGAGCAATCACATTCAGGGCAAGAACATTGGTCCACCTCCACCACAGTCGCCGCAACAGCAGCAGCAACAACAGCCCATTCCCGGCCAGCCTCCGACACCGTCGCAGCAGCAACAACAACAACAGCAGCAGCATCAACATCAACAACAACAGGGTCAACAGCCGCAGCAGCCCGGTCCAGTCGGGTCTCCGCGCCCACTCAACTATTTGAAGCAGCACTTGCAGCACAAGAGTGGCTATCCGCAGGGGTCACCACCGCCGCAGCCTCAAGGCTACGGAAACGGTCCGGGCATGCATCCGATGGGTCCGCCGTCGCACCACATGGGTCCGCCTTCGCAAGGCGCAATGGGCCCACCGCCGGCCTCGACCGGAACACCTCCGGGCCATATGCAAGAGCCCGGCATGGCCATTCCGAGCATCCATCATCCCGAAGGTCAGGACAACGGCATGTCGCAGGGATCGCATCCCGCTACGTCGATAATCACCACGGGACCGGACGGCGTCGGCCTCGACGAAGCAAGTCAGCAAAGTACTCTATCAAACACGTCTATCGCGTCAGTAGAGGACCCGCAGTCAACTCCCAAGTCGCGCAAGACAAACGAGATGATGTATCCGGGCCTCGCCGGTCAGGCAAATGTCTCGCCGAGCACGAGTGGTGGCATGCCACACAGCGAGGACTTTGAAATGGGATCTCCTCCGTGGCCTCGAACGCCGGCCAGCCCGGTGTTCAATAGTCATGCTCCGCCACCGGTGTCAGCACAAGATTCGTTTAGATCATCGAAAATAACGGTTACCAAAAGTAAGACATGGAAAGACGTCGCCGGTTTGCTAGGAATCGGCGCCAGCAGTAGCGCAGCATACACGTTAAGGAAACACTACATTAAAAGTATTTTGCCCTTTGAATGCCAATTTGATCGGGGCGGTATCGACCCGGGTCCCATTATCCAGTCGGTCGAGGTCGGATCAAAGAAAAAGACACAGAAAGCGACATCGGTTCCATCGCCCGGCTCGAGCAACTCGCAAGACTCGTTTCCGGCTCCGCCAAGCAGCAGCCTCGATGCTTACTATGGTTCAGCACCCGGACAATATCCACCAGCACCGCCTTCTGGCCAGCAAGAATATGGTCCCGCAATGCCACGACCACCGTCTCAATCAAGCACTCAGCCAGGATCTGGTAATGCACCACCACCTACTAACGATAACATAAGTGTGAGCAATCCTTTTGAAGATTCCGTTGCATCGCGTCCCCCTTATCAACAGCCACAGCAGCAACACACTGGTGCTCAATATCCTAGACCTCCAGGTCCCTATCAAGGTCAATATGGTCAGCCGCCGTTTGGTCCGGGTCCAGAGCAGCAGCAGCAACCTTACCCGCATGGACCTCACAATTCGGGTCCAGGACCAAACCAATATCCACCATCGCAGAATCAATATCCAAACAACAGACAAATGTACGGCCCATACGGTCCCGAAGATTCTAATTTCAGAAACTCGGCTCCGCAAAGTGACGCCTATCGAGGCTACGGTCACGGTCCTCACTATCCACCACCACAAGGGCCGGGAAGCCAACAAGGCCCACGACCACCGTTCGGTCCACAGCAGCCACAGCAACAGCCTTCATCTGCGTCACCTTCGCCGCAAGCATCGGTCGCTTCTTCGGTTCCCTCGGTAACGAGCGGCTCGCAAGGACCGCATGCAACTCCCTCAGTGACGCCATCATCTGTAAATAGTAATGCACCTTCGAACCAAAACCAGTCACCTTCGGTTCCGCCACCGCCAACACAGAACTTTGGACCACCCAACAGTCAAGAGTACTACAATCGACCAGAACAGAATGCACCGCCAAGGCGGCATCCTGACTTTACAAAAGATCCGAATCAGCAACCGTATTCACCGTATGGCGCACAACGTCCACAGCAGATGTATGGAGGATGGCCACCAAACAGCAGCGGTTCGCAGTTTAGACCGCAGTATCCGCCACAAGGGCCACCGAATCAGTGGCCAAACCAAGGACCTCCACGACCTCAAGGTTCAAATCAATGGGATCAGCAGAACCGCTATCCGATGAACCAACAGTACGGGCCGAATCAGCCGTGGCAGCAAGGCCCCATGAGACCCCCGCAGCGAGGTGGAAAGCCCTTCTCGATGCCTCCGCCGCCACAAGGACCACAACAAATCAATAAAATGCCAAACCAATACGGACCGCCGCACATGCATCATCCGGGAATGCAGGGCGTAGGAATGCAAGGTCCCGGTGCGCAGCACGGACCACCGCAGCAAGGAGCACAAGTGAAGAGAGACATCGTATTTCCGTCGGACGCCGTCGAAGCGACGCAGCCTCTGCTCTATCGAAGAAAGCGAATGACGAAGCACGACGTGAGCCCCGTCGACCCGTGGAGAATCTTCATGTCACTCCGGTCTGGTCTCTTGTCCGAGAGCACTTGGGCGATAGACGTACTGAACGTTCTACTCTTCGACGACACGACGGTCGTCTACTTTGGCTTGACTCACTTGCCGGGACTGTTGAATCTTTTGCTGGAGCACTTTCAAAAGAGCCTCGCCGACACATTCGAGACAAAGTCCATATCGAGTGTGCCTACCATTGCCACCGTTGCCGCCATAAAGGATTCAAACGAGAGCGACGGCACCAAGAATGATGACGAGTGTAACAAAACTAATGGTGGTGATAATAAGTTAATAAGTAGCAATTTAGTTAGTAATAGTAATAGTGATACTGGTGATACTAGGTGTATTAAGAAACAAATTCAAATGCCAGCGAATCGCGAAGAACAAGACTCTTCAGTTGATTTGGGTTCAGTTACCGAAAACGATCTACCAAATCCAAACGAGCATATTGTGGTATTAAAGTCTTATAATTATACAATGCAATCGAGAAAGGGCGTTGCGGTCAAACTTCAAGATTCGAGCAACGACATTTTCATCATGGACAGCCAGCGGATGTGGGACAAAGTTTGCAATCGCGACTACTTCCTCAAGGCCACCGTTGAGGATGATCCGTTCAACGTTGGAAAGGAGCCGAACGACATCGAGTACATTATGGATTGCTTCAAAGCCGAATTTGCACACATTCCATTTTCGCGCTGCATCAAGAGTTCAAAGAGTGCCGAGTCAATCGAAAAGACGCGCAAAGTCGCTGAAGTGAAGCCAAAGCGCATGAGACTGTCTTCGGAGGAGGAGCGCGAGGTCGAGGAGTTGACGAGAAAGCTGTACAAGGCTCCACTCAAGCAACCGACCGTCAACAATGCTGTGTACAAGAAGGATTCAAACTCCTCGGACGCTGATTGTCGACAGGTCGACATGGAGATTGAAAAGGTTCCAAACGGTCCAGTGAATTCTGACGCAGCGCTTGACGGTGCAGAAGCCGAAAAGGCCGGCGAAGAGAACTCCACGACGAAGGAGGAAAGCGCAGAAACCAAGACTGAATTTGATATTAAAAGTACTGTTCGTGATGTGGCAAAGTGCTTGAAGCGAAGGCGCATGAGCGACTACGAGGACGAGTGTTACACGCGCGACGAGGCGAGTTTGCACTTGATCAGCGACAGCCAAGACTCTCTCGCTCGACGATGCATCTGCCTCTCGACGATCCTCCGAAATCTCACATTCGTTCCCGGCAACGAGCTCGAATTTTCCCGATCAACGACCTTCTTATCGATTCTCGGAAAACTCCTGCTTCTCCATCACGAGCATCCGATTCGAACGAAAAAGCAGCGAAACTATGATCGCGAAGAGGACGCAGACTTCTCCGACTCGTGCAGCAGCCTGCAGGGAGAGCACGAGTGGTGGTGGGACTTTTTAGTGCAAATTCGCGAGAACATGCTCGTGGCGTTGACGAACATTTCGGGATACTTGGACTTGTCGGCCTACGATGAGCCGATTTCGAGGCCCATTCTCGACGGACTTCTCCATTGGGCCGTGTGTCCGTCTGCGCACGGACAAGATCCCTTCACAACGCTCGCTAACAACAGTCCGATCAGTCCACAGCGGCTGGCATTGGAAGCTCTGTGCAAACTGTGCGTAACAGATGCGAACGTGGATTTGGTGATTGCAACACCACCGTTTTCACGACTCGAGAAGCTCTGTGCCGTTCTCACGAAACATCTGTGCAAAAACGAGGATCAGGTGCTACGAGAGTTCTCAGTGAATTTGCTGCACTACTTAGCGAGTGCCGATAGCGTCATGGCACGCGTCATTGCGAAGCAAAGTCCTTGCGTGTCCTACCTGGTGGCGTTCATCGAGCAGGCCGAGCAGACTGCCTTAGGCGTTGCCAACCAGCACGGCATCAACTTCCTGCGCGAAAATCCTGACTCGATGGGAACGAGCCTGGACATGCTGAGACGGGCGGCCGGGACACTGCTGCATCTGGCGAAGCATCCTGACAACCGACCGCTCTTCATGCAGCAAGAGCAGCGGCTTCTCGGTCTCGTGATGAGTCACATTTTGGACCAGCAAGTCGCACTGATAATCTCGCGAGTTCTCTTTCAAACTTCACGGGGCAGCGGCCCATTGACAACGACGCAGCAGAACGAGACTCAGAGCGACGAAGCACCGCAAAAAATACTTCCAGAAAGCCAGAAGAATTCTTCACAAAACACATCACAGATTGCAAACTTCGAGCAGAGCCAGAAAACTCCAGCTGTTGTTCACAACTCAACGCATTCGAGTGTACAATCGCAAAACTTTCCACCCTTGATGAAAACACCTCAACAATTTCTATCAACTCAAACCAAATTGTTAAATAGTAGTAACAGCAATGACGAAAGCATGAAATCGAAGTTCAACACGTTAAACAAACAAATTACAGCGAATGCGACTTCCGCTCAGTCATCGTCACCTCCTTCAATTCCTCAAACGGTTACGGCTTCATCT
Protein: 2365 (aa)
MASQPSEHLQNDTGNNQGIKVNEYQQQQQQEILTKLQNGGQTNQPPPVSAVTSDQQQQHGKGMKSPPSNGNSGHTNPNEMMPNVPGYHHQDSSSLGMPPQQQQHPGQQHMHHHPSAGNEKDDIQQQQQQQPPHHQQQHPMYGHQPMHPMHAPQQHMPGHHLPMHPHQQRYPHHPHAPPPMQHPMHSHDPSQQQQQMDPYAHYRGMMGPRPPQRYGLAPAPGPQGPMPNNAQNVPANAGGGQQGPTPTLNSLLQSQSSPSPQQSPQSGPPPHRYGPYDPYAQPVNAAAAAAAAAAASAQQGPPPPNSGSSSPMPPTHTQSQPPPQQQQQQGWAPPPRPYSPHQQYRGPPPPTGNSSRGQSPYPPPPTSGVQSPGPYPGPNQQQGTQPPPGPPQQYQYPQRYPTPPGPGGQQQSMGPQNHRPPYSQWPSPAASPGPHLGPPPPSQSPHAPPQSPGPQQQTPLQQHSAPSPSSQQQPQSPHQYLNRPSQPSTPSANDNEMIGVNQKKKNSSAKKKTKKQQKQEAAAAAAAQNNSNENSSNLAVSSQQQAPPSQPPSSNNASQQPGSQMRPISSPNSSSSGSRSMSPAVVGQQNLPMPPRPSSSHSQGMSMPNQQQQQQGNQSLNIPNSANPQMEGAQMPGAPQGMPQGYGGGPKMPHGSYNMSPYPPQSQYSQGSYSPRYPGYGPSSQHHPPPPNSPSQYRPMQNHVNPAGHPQYPPHAPYHHQVWPPPPQNSGNNPGAMSNHIQGKNIGPPPPQSPQQQQQQQPIPGQPPTPSQQQQQQQQQHQHQQQQGQQPQQPGPVGSPRPLNYLKQHLQHKSGYPQGSPPPQPQGYGNGPGMHPMGPPSHHMGPPSQGAMGPPPASTGTPPGHMQEPGMAIPSIHHPEGQDNGMSQGSHPATSIITTGPDGVGLDEASQQSTLSNTSIASVEDPQSTPKSRKTNEMMYPGLAGQANVSPSTSGGMPHSEDFEMGSPPWPRTPASPVFNSHAPPPVSAQDSFRSSKITVTKSKTWKDVAGLLGIGASSSAAYTLRKHYIKSILPFECQFDRGGIDPGPIIQSVEVGSKKKTQKATSVPSPGSSNSQDSFPAPPSSSLDAYYGSAPGQYPPAPPSGQQEYGPAMPRPPSQSSTQPGSGNAPPPTNDNISVSNPFEDSVASRPPYQQPQQQHTGAQYPRPPGPYQGQYGQPPFGPGPEQQQQPYPHGPHNSGPGPNQYPPSQNQYPNNRQMYGPYGPEDSNFRNSAPQSDAYRGYGHGPHYPPPQGPGSQQGPRPPFGPQQPQQQPSSASPSPQASVASSVPSVTSGSQGPHATPSVTPSSVNSNAPSNQNQSPSVPPPPTQNFGPPNSQEYYNRPEQNAPPRRHPDFTKDPNQQPYSPYGAQRPQQMYGGWPPNSSGSQFRPQYPPQGPPNQWPNQGPPRPQGSNQWDQQNRYPMNQQYGPNQPWQQGPMRPPQRGGKPFSMPPPPQGPQQINKMPNQYGPPHMHHPGMQGVGMQGPGAQHGPPQQGAQVKRDIVFPSDAVEATQPLLYRRKRMTKHDVSPVDPWRIFMSLRSGLLSESTWAIDVLNVLLFDDTTVVYFGLTHLPGLLNLLLEHFQKSLADTFETKSISSVPTIATVAAIKDSNESDGTKNDDECNKTNGGDNKLISSNLVSNSNSDTGDTRCIKKQIQMPANREEQDSSVDLGSVTENDLPNPNEHIVVLKSYNYTMQSRKGVAVKLQDSSNDIFIMDSQRMWDKVCNRDYFLKATVEDDPFNVGKEPNDIEYIMDCFKAEFAHIPFSRCIKSSKSAESIEKTRKVAEVKPKRMRLSSEEEREVEELTRKLYKAPLKQPTVNNAVYKKDSNSSDADCRQVDMEIEKVPNGPVNSDAALDGAEAEKAGEENSTTKEESAETKTEFDIKSTVRDVAKCLKRRRMSDYEDECYTRDEASLHLISDSQDSLARRCICLSTILRNLTFVPGNELEFSRSTTFLSILGKLLLLHHEHPIRTKKQRNYDREEDADFSDSCSSLQGEHEWWWDFLVQIRENMLVALTNISGYLDLSAYDEPISRPILDGLLHWAVCPSAHGQDPFTTLANNSPISPQRLALEALCKLCVTDANVDLVIATPPFSRLEKLCAVLTKHLCKNEDQVLREFSVNLLHYLASADSVMARVIAKQSPCVSYLVAFIEQAEQTALGVANQHGINFLRENPDSMGTSLDMLRRAAGTLLHLAKHPDNRPLFMQQEQRLLGLVMSHILDQQVALIISRVLFQTSRGSGPLTTTQQNETQSDEAPQKILPESQKNSSQNTSQIANFEQSQKTPAVVHNSTHSSVQSQNFPPLMKTPQQFLSTQTKLLNSSNSNDESMKSKFNTLNKQITANATSAQSSSPPSIPQTVTASS
| Type | Start | End | Length |
| CDS |
5641 |
6693 |
1053 |
| CDS |
11587 |
11805 |
219 |
| CDS |
11882 |
12046 |
165 |
| CDS |
12652 |
12711 |
60 |
| CDS |
16170 |
16226 |
57 |
| CDS |
22355 |
22559 |
205 |
| CDS |
24339 |
25340 |
1002 |
| CDS |
25422 |
25657 |
236 |
| CDS |
26048 |
26432 |
385 |
| CDS |
27033 |
27161 |
129 |
| CDS |
27631 |
27805 |
175 |
| CDS |
27879 |
28233 |
355 |
| CDS |
28560 |
28653 |
94 |
| CDS |
28718 |
28875 |
158 |
| CDS |
28940 |
31741 |
2802 |
| intron |
6694 |
11586 |
4893 |
| intron |
11806 |
11881 |
76 |
| intron |
12047 |
12651 |
605 |
| intron |
12712 |
16169 |
3458 |
| intron |
16227 |
22354 |
6128 |
| intron |
22560 |
24338 |
1779 |
| intron |
25341 |
25421 |
81 |
| intron |
25658 |
26047 |
390 |
| intron |
26433 |
27032 |
600 |
| intron |
27162 |
27630 |
469 |
| intron |
27806 |
27878 |
73 |
| intron |
28234 |
28559 |
326 |
| intron |
28654 |
28717 |
64 |
| intron |
28876 |
28939 |
64 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001854080 |
conserved hypothetical protein [Culex quinquefasciatus] gb|EDS34417.1| conserved hypothetical protein [Culex quinquefasciatus] |
0.0 |
| InterPro |
IPR016024 |
Armadillo-type fold |
|
| InterPro |
IPR021906 |
Protein of unknown function DUF3518 |
|
| InterPro |
IPR001606 |
ARID/BRIGHT DNA-binding domain |
|
| Gene Ontology(CC) |
GO:0005622 |
intracellular |
|
| Gene Ontology(MF) |
GO:0003677 |
DNA binding |
|
| Gene Ontology(MF) |
GO:0005488 |
binding |
|
| Pfam |
PF12031.3 |
Domain of unknown function (DUF3518) |
5.4e-121 |
| Pfam |
PF01388.16 |
ARID/BRIGHT DNA binding domain |
8.7e-05 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| H. sapiens |
ENSP00000387636 |
| A. aegypti |
AAEL017280 |
| H. sapiens |
ENSP00000320485 |
| B. mori |
BGIBMGA010273-TA |
| C. quinquefasciatus |
CPIJ010152 |
| M. musculus |
ENSMUSG00000007880 |
| N. vitripennis |
NV17809-PA |
| H. sapiens |
ENSP00000363267 |
| D. plexippus |
DPOGS207345PA |
| H. sapiens |
ENSP00000275248 |
| H. sapiens |
ENSP00000313006 |
| P. humanus |
PHUM080380-PA |
| H. sapiens |
ENSP00000442437 |
| P. vanderplanki |
Pv.17090 |
| D. melanogaster |
FBgn0261885 |
| H. sapiens |
ENSP00000344546 |
| A. gambiae |
AGAP001786 |
| T. castaneum |
TC013586 |
| H. sapiens |
ENSP00000390317 |
| H. sapiens |
ENSP00000412835 |
| H. sapiens |
ENSP00000055163 |
| H. sapiens |
ENSP00000356116 |
| A. mellifera |
GB17648-PA |
| S. invicta |
SI2.2.0_16128 |
| M. musculus |
ENSMUSG00000069729 |