MidgeBase gene description page [Pn.04030]
Outline
| Gene ID | Pn.04030 |
| Type | Protein coding gene |
| Scaffold | PnScaf3329 |
| Start | 13185 |
| End | 15299 |
| Direction | - |
Sequence
Transcript: 1638 (bp)
ATGAATAGTAATTTTACCTCTCAGAGTGATAACGGAATCGAGATGAAGGAGAGTGAAGCTATCGCAGAATGTGGTGATTTGAAATCGTCGGAAGTGTCGGATGCTGAGGCGGTTAATAGTTCTGCTCAAGTGCTTGAAACACCAGCCGAGCGAAAAACCCGCATGCTATCACTCAACATTATCTACTTCACGGTGTTTCTTATGACTCTGGGCTTTTCAATCATTCTTACCGGAATATGGCCGTACCTGGACGAGCTGGACAAGTCAGCGGGAAAAATGTTCATGGGCTGGATTGTGGCGGCAAATCCTCTCGGACAATTCATTTTCTCGCCCTTTTTCGGCTGGTGGGCCAACAAAGCCAAGTCAATAAGAACGCCGTTCACCATTTCGCTGATTGTTTTCTGCATCTCAAGTGCGGTCTATTCTTGCCTAGACAGTGTACGGACTCATGTAAAATATTGGATGATAATTGCTCGTTTTTTTGTCGGCGTATCGTCTGCCAATATCGTCATTTGCAGGAGCTATGTTTCTGCGGCAACTAAACTCTCGGAGAGAACAAAGGCTGTGTCCTACTTGACACTTGCACAAACACTAGGATTCATTTTTGGGCCATTGTTCCAAGGCGTGTTCACCCCACTCGGACGAAAAGGATACATGATGGCCTTCAATCTTCGATTCTCAATGTTCACCGCACCGGGATGGCTAAATGCCCTCCTAGGCTTGCTGAACTTAATTCTCTTCCATCCAAGATTCTTTCAAGACAAGCGAATCGCAGCACGCGAGCAAATGCTGATACTGGGAAAAGAGTCGGAAAAGGAGGCATGGAAGACAATCAAGCCAGATCTGGCCGTGTCTTGGGCTCTGATATTTTCACTCTTTGTGTTCGTCTTCAATTTCGTGCTGCTCGAGAGCATAGGAACGGCACTGTCCATGGATCAGTATGCGTGGACAAAGAAGCAGGCGCTCCAGAACATGGCTTACATAATGGGTGTTGGTGGCGTGATAGCGTGCGGTACTTTTCTCGCAATATCACCGCTTTGTAAGCGATTCAAGGAGAATGACGTGCTAATTTATGGAGGCTTCTTTATGATGGTCTTAGTGCGCTTCATACACATTCCTTATGGTGATAGAATTCCAAAATTAGCTTTACCCAAAGAGCACACGTTCGAGAACGGAACGCATGTGATATTTGATGATGATGATCCTCATCTTCTTGGCTGCCCCGTTTCGAAGCAAGAATGGTGTGCAACGACGCCCGCTCTAGGTTTCTATGAGTTCCTCATCGGATATTTTCTCATGTCAGTCGGCTACCCCATCGGCCTGACGCTCATCCAAACAATCTTCTCCAAAGTCCTCGGCCCACGACCGCAAGGCGTTTGGATGGGCTTCATAACCAACGCAGGCAGCCTATCGAGGATTTTCGGGCCGATTTTTGTGTCCGTTATTTATACTGAGCTCGGTACTTTGTGGACGATGTCTCTTAATCTGCTCATCATGCTAATTCCGACAGTGTGGCTCTTAGTGCTAAAAGATCGACTTTTGATTGAGGACTTTCGAGGCAAAACCATTGAAATGGATGAATGCAACGAGCTAAAAACAAACCTGCAAAACAATAAAGTAGGCAAAGAAGATGACAGC
Protein: 546 (aa)
MNSNFTSQSDNGIEMKESEAIAECGDLKSSEVSDAEAVNSSAQVLETPAERKTRMLSLNIIYFTVFLMTLGFSIILTGIWPYLDELDKSAGKMFMGWIVAANPLGQFIFSPFFGWWANKAKSIRTPFTISLIVFCISSAVYSCLDSVRTHVKYWMIIARFFVGVSSANIVICRSYVSAATKLSERTKAVSYLTLAQTLGFIFGPLFQGVFTPLGRKGYMMAFNLRFSMFTAPGWLNALLGLLNLILFHPRFFQDKRIAAREQMLILGKESEKEAWKTIKPDLAVSWALIFSLFVFVFNFVLLESIGTALSMDQYAWTKKQALQNMAYIMGVGGVIACGTFLAISPLCKRFKENDVLIYGGFFMMVLVRFIHIPYGDRIPKLALPKEHTFENGTHVIFDDDDPHLLGCPVSKQEWCATTPALGFYEFLIGYFLMSVGYPIGLTLIQTIFSKVLGPRPQGVWMGFITNAGSLSRIFGPIFVSVIYTELGTLWTMSLNLLIMLIPTVWLLVLKDRLLIEDFRGKTIEMDECNELKTNLQNNKVGKEDDS
| Type | Start | End | Length |
| CDS |
13188 |
14230 |
1043 |
| CDS |
14306 |
14392 |
87 |
| CDS |
14487 |
14762 |
276 |
| CDS |
14823 |
15050 |
228 |
| CDS |
15296 |
15299 |
4 |
| intron |
14231 |
14305 |
75 |
| intron |
14393 |
14486 |
94 |
| intron |
14763 |
14822 |
60 |
| intron |
15051 |
15295 |
245 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001659805 |
hypothetical protein AaeL_AAEL009195 [Aedes aegypti] gb|EAT38955.1| conserved hypothetical protein [Aedes aegypti] |
1e-152 |
| InterPro |
IPR020846 |
Major facilitator superfamily domain |
|
| InterPro |
IPR011701 |
Major facilitator superfamily |
|
| InterPro |
IPR016196 |
Major facilitator superfamily domain, general substrate transporter |
|
| Gene Ontology(BP) |
GO:0055085 |
transmembrane transport |
|
| Gene Ontology(CC) |
GO:0016021 |
integral to membrane |
|
| Pfam |
PF07690.11 |
Major Facilitator Superfamily |
4.3e-38 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| T. castaneum |
TC010995 |
| S. invicta |
SI2.2.0_14075 |
| A. mellifera |
GB13898-PA |
| D. melanogaster |
FBgn0035767 |
| D. plexippus |
DPOGS203228PA |
| B. mori |
BGIBMGA009191-TA |
| C. quinquefasciatus |
CPIJ017477 |
| H. melpomene |
HMEL003245-PA |
| P. vanderplanki |
Pv.01616 |
| P. vanderplanki |
Pv.06465 |
| N. vitripennis |
NV18806-PA |
| A. gambiae |
AGAP012381 |
| P. humanus |
PHUM613120-PA |
| A. aegypti |
AAEL009195 |
| H. sapiens |
ENSP00000425000 |
| M. musculus |
ENSMUSG00000025759 |
| H. sapiens |
ENSP00000296468 |