MidgeBase gene description page [Pn.03982]
Outline
| Gene ID | Pn.03982 |
| Type | Protein coding gene |
| Scaffold | PnScaf3299 |
| Start | 55233 |
| End | 56491 |
| Direction | + |
Sequence
Transcript: 1182 (bp)
ATGGCATTTAAGTGTTTGCTGACAAACGCAACTGGGAGATTTGTCGGACGATCTGTTCTTCAGCATAGAAATGCAAATTTAGTGCGGTATTATGCAACGAAAATCGAACCAAAGAAAAAAACCTCGTCCTTAAAGTTGCTTTTGATTGGAGGAGCAATTGGAGGAACAGTTGGAGCGGCTTATTCGTTTTACGACAACATTGGCAAGAAAAAGCCAGTACCAAAAGATTTGACGCCGAAAATTCTCGATAAAAAGCCGGATGTCCCTGTTATGAGAAAAATCATAAATCCAAATGACAAGAGTGATCTCGACATTGTGCTGTTCCAATTTCAAACCTGCCCATTCTGCTGCAAAGTGCGATCCTTTCTCGATTATTCCGGCCTATCCTACTCAATTGTGGAAGTCGATGCCGTTCTTCGAGACAGCATTAAGTGGTCGGAGAGCAAGAAAGTGCCGATTGTTCTCGTGAAATCGAAGAAAGACGGAAAGTACGTGCAGCTGAATGACTCAAGCGTGATAATTTCGGCAATTTCAAGCCTTCTCATCGATCCATTGAAGAATGACATCGCAGACGTAGTCAACTACTACCCCGTTAGCACATTTACCGACGTCTATGGCACAGTGCACGACATCGCCAACAAATATTTCCTCATGTTTCAAGACAAGAAGCCCAAGGAAAGCAAGGAATATTTCGACGAAGAACGACGGTGGAGAAGCTGGGCGGACCAGTCGCTTGTGCATCTCATAAGCCCGAACGTTTACCGAACATACAGCGAAGCTCGAGAGACCTTCAATTGGTTCAGCGAGGTGGGACAGTGGAGTGCATACTTTCCGGAATGGGAACGAAACTTGATGGTGCAAGTGGGAACTTTTGCTATGTGGCTCATCAGCAAGCGTCTCAAGAAGAAGCACGGCTACAGCGATGACGTTCGTTCACATCTCTATGACGCATGCGACAAGTGGATGGATGCTCTCGCGCAAAAAAAGACAAAATTCATGGGCGGAAATGAGAGCCCTAATCTTGCCGACTTGTCCGTGTATGGCGTGCTGTGCAGTATGGAGGGTTGTGAAGCTTTCAAGGATTGCCTGGACAACACCGGAATCGGAAATTGGTTCTACGAGGTCAAAGCCAAGGTAGAAAGTAATCGTGGATACCGAAAGCCGGCTAGCCTATATGCCGTA
Protein: 394 (aa)
MAFKCLLTNATGRFVGRSVLQHRNANLVRYYATKIEPKKKTSSLKLLLIGGAIGGTVGAAYSFYDNIGKKKPVPKDLTPKILDKKPDVPVMRKIINPNDKSDLDIVLFQFQTCPFCCKVRSFLDYSGLSYSIVEVDAVLRDSIKWSESKKVPIVLVKSKKDGKYVQLNDSSVIISAISSLLIDPLKNDIADVVNYYPVSTFTDVYGTVHDIANKYFLMFQDKKPKESKEYFDEERRWRSWADQSLVHLISPNVYRTYSEARETFNWFSEVGQWSAYFPEWERNLMVQVGTFAMWLISKRLKKKHGYSDDVRSHLYDACDKWMDALAQKKTKFMGGNESPNLADLSVYGVLCSMEGCEAFKDCLDNTGIGNWFYEVKAKVESNRGYRKPASLYAV
| Type | Start | End | Length |
| CDS |
55233 |
55382 |
150 |
| CDS |
55457 |
56488 |
1032 |
| intron |
55383 |
55456 |
74 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_315097 |
AGAP004992-PA [Anopheles gambiae str. PEST] gb|EAA10500.4| AGAP004992-PA [Anopheles gambiae str. PEST] |
1e-121 |
| InterPro |
IPR002109 |
Glutaredoxin |
|
| InterPro |
IPR010987 |
Glutathione S-transferase, C-terminal-like |
|
| InterPro |
IPR011767 |
Glutaredoxin active site |
|
| InterPro |
IPR012336 |
Thioredoxin-like fold |
|
| Gene Ontology(BP) |
GO:0045454 |
cell redox homeostasis |
|
| Gene Ontology(MF) |
GO:0015035 |
protein disulfide oxidoreductase activity |
|
| Gene Ontology(MF) |
GO:0009055 |
electron carrier activity |
|
| Pfam |
PF13409.1 |
Glutathione S-transferase, N-terminal domain |
2.9e-06 |
| Pfam |
PF13417.1 |
Glutathione S-transferase, N-terminal domain |
3.2e-09 |
| Pfam |
PF00462.19 |
Glutaredoxin |
2.5e-10 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| H. sapiens |
ENSP00000411378 |
| H. sapiens |
ENSP00000345341 |
| B. mori |
BGIBMGA000723-TA |
| P. humanus |
PHUM580720-PA |
| A. gambiae |
AGAP004992 |
| T. castaneum |
TC003180 |
| S. invicta |
SI2.2.0_06586 |
| D. melanogaster |
FBgn0004465 |
| H. melpomene |
HMEL002819-PA |
| H. sapiens |
ENSP00000420171 |
| A. aegypti |
AAEL008776 |
| A. aegypti |
AAEL008783 |
| D. plexippus |
DPOGS206133PA |
| C. quinquefasciatus |
CPIJ003988 |
| P. vanderplanki |
Pv.00388 |
| M. musculus |
ENSMUSG00000026820 |
| N. vitripennis |
NV17215-PA |
| A. mellifera |
GB17749-PA |
| C. quinquefasciatus |
CPIJ018524 |