MidgeBase gene description page [Pn.03891]
Outline
| Gene ID | Pn.03891 |
| Type | Protein coding gene |
| Scaffold | PnScaf3222 |
| Start | 50741 |
| End | 51585 |
| Direction | - |
Sequence
Transcript: 780 (bp)
ATGGCTAGAAATGCAGAGAAGGCGATGACAACGCTTGCTCGGTGGAGAGCGGCAAAGGAGGCGGAAACGGGCAAGAACGAAAGACGGCCGTATTTGGCGAGCGAATGCACGGATGTGAAGAAATGCGAAAAATGGAGAATCGAAATTATCCGCGAGATTTCAAAGAAAGTCGCCCAAATTCAGAATGCGGGTCTCGGTGAGTTCCGCATACGCGATCTGAACGATGAGATAAACAAGCTGCTGCGAGAAAAGAGACATTGGGAGAACCAGATATCGAATCTCGGCGGACCTCATTATCGGCGCTACGGTCCGAAAACTTTTGACAGCGAGGGACGGGAAGTGCCAGGAAATCGCGGATACAAATACTTTGGAGCAGCAAAGGACTTGCCGGGTGTTCGTGAGCTTTTCGAGCAGGAACCGCCACCGCCGCCCAAAAAATCGCGAGGAGAGCTGATGAGGGAAGTGGATGCCAGTTACTACGGCTATCTCGACGACGATGACGGCGTGCTGATTCCGCTCGAAGAAAAGGCATCGAAGGAGGCCATGAAGAAGACGATGGAGGAGTGGAAGGAGAAGCTCAAGAGAGGAGAAATCAAGACCGCGGGCGATGACGACGAGGAAGAGGAGTATAGTGGCAAGCAGATGGAAATTGATGTCAACGAGGAGTTGCTGGCTCCGCGCTTTGTGTCTCATGTTGACGTACCGACGCAGAAAGACATCGAAGAAGCGCTCCTGCGAAAAAAGAAGAAAGAGTTGATGGAAAAATATGGCATTACACAA
Protein: 260 (aa)
MARNAEKAMTTLARWRAAKEAETGKNERRPYLASECTDVKKCEKWRIEIIREISKKVAQIQNAGLGEFRIRDLNDEINKLLREKRHWENQISNLGGPHYRRYGPKTFDSEGREVPGNRGYKYFGAAKDLPGVRELFEQEPPPPPKKSRGELMREVDASYYGYLDDDDGVLIPLEEKASKEAMKKTMEEWKEKLKRGEIKTAGDDDEEEEYSGKQMEIDVNEELLAPRFVSHVDVPTQKDIEEALLRKKKKELMEKYGITQ
| Type | Start | End | Length |
| CDS |
50744 |
51167 |
424 |
| CDS |
51230 |
51585 |
356 |
| intron |
51168 |
51229 |
62 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001990274 |
GH19249 [Drosophila grimshawi] gb|EDV93336.1| GH19249 [Drosophila grimshawi] |
1e-106 |
| InterPro |
IPR009360 |
Isy1-like splicing |
|
| Pfam |
PF06246.7 |
Isy1-like splicing family |
9e-99 |
| Pfam |
PF11505.3 |
Protein of unknown function (DUF3216) |
0.02 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| H. sapiens |
ENSP00000273541 |
| P. humanus |
PHUM490930-PA |
| C. quinquefasciatus |
CPIJ016037 |
| D. plexippus |
DPOGS207595PA |
| N. vitripennis |
NV11563-PA |
| A. mellifera |
GB13635-PA |
| M. musculus |
ENSMUSG00000030056 |
| P. vanderplanki |
Pv.06142 |
| H. sapiens |
ENSP00000411822 |
| H. melpomene |
HMEL009729-PA |
| A. aegypti |
AAEL007203 |
| D. melanogaster |
FBgn0037550 |
| S. invicta |
SI2.2.0_05964 |
| H. sapiens |
ENSP00000376973 |
| B. mori |
BGIBMGA014074-TA |
| A. gambiae |
AGAP004225 |
| T. castaneum |
TC012663 |