MidgeBase gene description page [Pn.03881]
Outline
| Gene ID | Pn.03881 |
| Type | Protein coding gene |
| Scaffold | PnScaf3201 |
| Start | 20130 |
| End | 23397 |
| Direction | + |
Sequence
Transcript: 1683 (bp)
ATGAGTTTCCCAAAAGTATTACCGTCTGCTATCGAACTGCCACTAAATAAGAAAGAACTCGACGATGTGATTTCCAAGGCCAAAGATTGGGCACTCATGCATGGTATTTGTATGAGATCGAAAACCAATTTCAACATTGATACATTGCAGTTTGCACCATTCATTCTGACACCGTCGCTCTATCCACGCAAAGAGTTTGAAAAGGCTGTAAACCTTCAGACAACTTTAAATGTGCTGATTCATAAGGTCGCCCACGATGAAGAATTCTTAAGAGAGACACTCTCGAGCACCATCCAAGTTGATGAGTTTACTGGCAACTTATTCAAAATCTATGAAACCGTCTTGAGCGAGGGCTTTACACAGGAATTGTCACTTGGTTTAATTCGCTCTGACACGATGCTAGAAACTAAGAAAGGATGCATTGAAAAGTGCAAGAATTTAAATCCCAACTGTCCCAAACGATTTTATTGCTGTGTCGCAATGGTTGAGATAAATACGATTGCCTCTGGTTTTGGCCACTTGGGACCATCATCGCGAGCCATTCAAAGGATCATCTTCCGATGCATATTCAAATTTCTTAAACAATATACAAAAATAATTTTAAATTCTATCCTTAATTTAGGGCTGTTGCGTTCAGATTATTTTAATACCGCTAATAATAAAATTTTACAAGTGGAATTCAATACGATAGCTTCCTCGTTCGGTGGAATTTCGTCACAATTTCAGTCATTTCATAGCTACATTTTGAACGAGCTTGGTCATGGAGACAAAGTCAAAAACCTCCCAGAAAACAACGCTCTTTCGGGCTTGTGCAATGGAATGGTCGAGGCCTGGAACATTATTGGCAATCAACAAGCGGCAATTCTCTTCGTCATCGAAGACGTCACATACAATATTTGCGATCAGCGCTTTCACGAATTCGAAATTCGCACCAAATATCCACACATTAGAGTCCTTCGCAAGAATCTCACAGAAATCTACAACACTGGCGTTCTGGGGTCAAACAAGGAGCTCATCATTGACGGCACAGTAGTAAGTGTGGTCTATTTTCGTTCGGGATATGAACCAGCGCAGTACCCTTCGCAAAACGAATGGGACGCACGCCTTTTGATTGAGCGATCAGCCGCCATCAAGTGCCCTTCAATTCATTACCACTTGGCGGGTACAAAGAAGGTGCAACAGGCTCTTGCAAAGCCGGGAGCTCTCAAAAGATTCCTCTCAAATGACGAGGACATAGCTAAAGTCGAGGAAATTTTCACCGGGCTGTATTCGCTCGATAAGGCAGAAGGAGGCGAAGCGGTCGTAGAGATGGTGCTCAAAAACCCAGAGGCTTATGTCATGAAGCCTCAGCGCGAGGGAGGCGGAAACAACATTTACGGCGAAGACATTCCTGAGAAACTGAAGGCAATGAGTGAAGAAGAGAGATCAGCCTACATCGTCATGGACAGAATCTTTCCGCCGATCTCGCGCAGCTACATGGTAAGACCGGGTGCTGAATCGCTGCCCGAAATTGTCGACTTGGTGTCAGAACTCGGAATCTATGGTGCGATAATCGGAACAAAAGACAAAATTCTCTACAACCGCCAAGTCGGCCACATGCTTCGAACAAAAGTATCGAGCGCCAATGAAGGTGGAGTGGCTGCAGGCTTGGGCGCACTCGACAGTCCTTTTCTCTATATGGAC
Protein: 561 (aa)
MSFPKVLPSAIELPLNKKELDDVISKAKDWALMHGICMRSKTNFNIDTLQFAPFILTPSLYPRKEFEKAVNLQTTLNVLIHKVAHDEEFLRETLSSTIQVDEFTGNLFKIYETVLSEGFTQELSLGLIRSDTMLETKKGCIEKCKNLNPNCPKRFYCCVAMVEINTIASGFGHLGPSSRAIQRIIFRCIFKFLKQYTKIILNSILNLGLLRSDYFNTANNKILQVEFNTIASSFGGISSQFQSFHSYILNELGHGDKVKNLPENNALSGLCNGMVEAWNIIGNQQAAILFVIEDVTYNICDQRFHEFEIRTKYPHIRVLRKNLTEIYNTGVLGSNKELIIDGTVVSVVYFRSGYEPAQYPSQNEWDARLLIERSAAIKCPSIHYHLAGTKKVQQALAKPGALKRFLSNDEDIAKVEEIFTGLYSLDKAEGGEAVVEMVLKNPEAYVMKPQREGGGNNIYGEDIPEKLKAMSEEERSAYIVMDRIFPPISRSYMVRPGAESLPEIVDLVSELGIYGAIIGTKDKILYNRQVGHMLRTKVSSANEGGVAAGLGALDSPFLYMD
| Type | Start | End | Length |
| CDS |
20130 |
20218 |
89 |
| CDS |
20434 |
20494 |
61 |
| CDS |
20550 |
20762 |
213 |
| CDS |
20959 |
21143 |
185 |
| CDS |
21492 |
21552 |
61 |
| CDS |
21603 |
21730 |
128 |
| CDS |
22247 |
22289 |
43 |
| CDS |
22353 |
23051 |
699 |
| CDS |
23109 |
23259 |
151 |
| CDS |
23342 |
23394 |
53 |
| intron |
20219 |
20433 |
215 |
| intron |
20495 |
20549 |
55 |
| intron |
20763 |
20958 |
196 |
| intron |
21144 |
21491 |
348 |
| intron |
21553 |
21602 |
50 |
| intron |
21731 |
22246 |
516 |
| intron |
22290 |
22352 |
63 |
| intron |
23052 |
23108 |
57 |
| intron |
23260 |
23341 |
82 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_002011017 |
GI16238 [Drosophila mojavensis] gb|EDW05859.1| GI16238 [Drosophila mojavensis] |
0.0 |
| InterPro |
IPR016185 |
Pre-ATP-grasp fold |
|
| InterPro |
IPR013816 |
ATP-grasp fold, subdomain 2 |
|
| InterPro |
IPR005615 |
Glutathione synthase, eukaryotic |
|
| InterPro |
IPR014049 |
Glutathione synthase, N-terminal, eukaryotic |
|
| InterPro |
IPR014042 |
Glutathione synthase, alpha-helical, eukaryotic |
|
| InterPro |
IPR004887 |
Glutathione synthase, substrate-binding, eukaryotic |
|
| Gene Ontology(BP) |
GO:0006750 |
glutathione biosynthetic process |
|
| Gene Ontology(MF) |
GO:0005524 |
ATP binding |
|
| Gene Ontology(MF) |
GO:0004363 |
glutathione synthase activity |
|
| Gene Ontology(MF) |
GO:0016874 |
ligase activity |
|
| Pfam |
PF03199.10 |
Eukaryotic glutathione synthase |
1.8e-33 |
| Pfam |
PF03917.12 |
Eukaryotic glutathione synthase, ATP binding domain |
4.4e-165 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| A. gambiae |
AGAP000534 |
| H. sapiens |
ENSP00000439744 |
| P. vanderplanki |
Pv.11117 |
| D. plexippus |
DPOGS215524PA |
| A. mellifera |
GB11231-PA |
| M. musculus |
ENSMUSG00000027610 |
| B. mori |
BGIBMGA014063-TA |
| S. invicta |
SI2.2.0_09543 |
| P. humanus |
PHUM191330-PA |
| T. castaneum |
TC009391 |
| H. sapiens |
ENSP00000407517 |
| H. melpomene |
HMEL009625-PA |
| H. sapiens |
ENSP00000216951 |
| D. melanogaster |
FBgn0030882 |
| A. aegypti |
AAEL009154 |
| S. invicta |
SI2.2.0_07375 |
| T. castaneum |
TC009392 |
| N. vitripennis |
NV13373-PA |
| A. mellifera |
GB19965-PA |
| C. quinquefasciatus |
CPIJ009697 |
| D. melanogaster |
FBgn0052495 |