MidgeBase gene description page [Pn.03856]
Outline
| Gene ID | Pn.03856 |
| Type | Protein coding gene |
| Scaffold | PnScaf3168 |
| Start | 823 |
| End | 5826 |
| Direction | - |
Sequence
Transcript: 1461 (bp)
ATGGTGGACACCCAGCACTTTTGTCTGCGATGGAACAACTACCAGAGCAGCATCACGTCGGCATTCGAGAATCTTCGCGACGACGAGGACTTTGTCGACGTCACACTGGCCTGTGATGGACGCAGCTTGAAAGCTCACCGCGTTGTGTTATCAGCATGCAGTCCTTACTTTCGCGAGCTCTTAAAGAGCACTCCGTGCAAGCATCCCGTCATAGTACTTCAAGATGTCGCATTTACCGATCTGCACGCCCTCGTCGAGTTCATCTACCACGGCGAGGTGAACGTTCATCAGCGCTCGTTGAGCTCCTTCCTAAAGACAGCCGAGGTTCTCCGCGTGTCCGGATTGACACAGCAGCAGGCCGAGGAGACTCACAATTTAGCTCAAGTACAAAACATGGCGCAAGCGGGCGGCCGAACACCGTTGAATCATCATCAGAGCTTCACAGACAAACTCGTCGAGGAGGCGCTCCAGTTTCCGGTCGGCGCCTCGCCACCGCCCCACTTGAACAACATGCACAATCCGTCGGGCCACTCGGGCGCGACAGTCAACCAGTTGTTGCGTCGCGCGGCCGCGGCGGCAGCGATGCGACGCGAGCGCAACAGCTCGTGTCACTCGGACGACTTGCAGCTGAAGCGCCACCGCCCGGACAGCGGCCTGATGGGCGCGACTCTCGGCGGCAACAACAACAACAACAGCCTCGACATCATCAACCACATGCCGCAAATCACGGCGACCGACTTCTCGACCAACATCAAGCACCTGAACAACTTGTCGCCGCACATCAAAGATACTGAGCGCATGGACGTGAAGACGCCGAACGGTAAGCGCGGCGAGGCGGCGTGGCCGAGCGACAAGTGGGCGAGCGAGAGAGACTTGAGACTAATGAGTTGCTCCTCTCGTTTTGCAGGCAACAACAACAACACACTGGCCACGAACAACAACAACCCGAACAGCAGCAACAACAACCTGAAGGAGACGATCAACTTGACGACCAACGGCAATGGCGGCGGCAGCCTCGGCTCCACCACCGACAAGGAGAGCTTGACTCCCTCGCCCTCCGCCCGCTCCACCGACGACGTCAAGACCGAGCCCATGGAACTCGTGAGCAACAGCATCGGACCCGATGACGAGCACAGCAACGACTCCGTCGTCGACGCCGACCGACACTCCAGCGGCGGCGGCGGCGGCAATGGTGGCAATGGCAGCAACGACGCCAAGGGACCGCTTAGATTAAAATATAATTTTAGTACGTCGCACGAGGACGAGATGGAAGCGTTGCACAACCACACGGCGCCGCCCTTCCTCATGTCGCCCGGCGACAAGCTCTTTCCACCACCCGGCTCCTTCAACTTCTCCATGGCTGCTCTCGCTGATCCCAATGCTCTAGCTAACTTCAACTCGATGCAATCTGCCGCTGCTGAACTGGCTGGATCGCCTCAAGAACATATCAGAAAAAGTTCA
Protein: 487 (aa)
MVDTQHFCLRWNNYQSSITSAFENLRDDEDFVDVTLACDGRSLKAHRVVLSACSPYFRELLKSTPCKHPVIVLQDVAFTDLHALVEFIYHGEVNVHQRSLSSFLKTAEVLRVSGLTQQQAEETHNLAQVQNMAQAGGRTPLNHHQSFTDKLVEEALQFPVGASPPPHLNNMHNPSGHSGATVNQLLRRAAAAAAMRRERNSSCHSDDLQLKRHRPDSGLMGATLGGNNNNNSLDIINHMPQITATDFSTNIKHLNNLSPHIKDTERMDVKTPNGKRGEAAWPSDKWASERDLRLMSCSSRFAGNNNNTLATNNNNPNSSNNNLKETINLTTNGNGGGSLGSTTDKESLTPSPSARSTDDVKTEPMELVSNSIGPDDEHSNDSVVDADRHSSGGGGGNGGNGSNDAKGPLRLKYNFSTSHEDEMEALHNHTAPPFLMSPGDKLFPPPGSFNFSMAALADPNALANFNSMQSAAAELAGSPQEHIRKSS
| Type | Start | End | Length |
| CDS |
826 |
845 |
20 |
| CDS |
1041 |
1091 |
51 |
| CDS |
1365 |
1525 |
161 |
| CDS |
1947 |
2649 |
703 |
| CDS |
2736 |
2886 |
151 |
| CDS |
3027 |
3215 |
189 |
| CDS |
5641 |
5826 |
186 |
| intron |
846 |
1040 |
195 |
| intron |
1092 |
1364 |
273 |
| intron |
1526 |
1946 |
421 |
| intron |
2650 |
2735 |
86 |
| intron |
2887 |
3026 |
140 |
| intron |
3216 |
5640 |
2425 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
AAS80326 |
broad complex isoform Z1 [Aedes aegypti] |
1e-135 |
| InterPro |
IPR013069 |
BTB/POZ |
|
| InterPro |
IPR011333 |
BTB/POZ fold |
|
| InterPro |
IPR000210 |
BTB/POZ-like |
|
| Gene Ontology(MF) |
GO:0005515 |
protein binding |
|
| Pfam |
PF00651.26 |
BTB/POZ domain |
3e-25 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| H. melpomene |
HMEL012335-PA |
| C. quinquefasciatus |
CPIJ003269 |
| A. mellifera |
GB14070-PA |
| A. aegypti |
AAEL008426 |
| A. gambiae |
AGAP002165 |
| T. castaneum |
TC005474 |
| P. vanderplanki |
Pv.06468 |
| D. plexippus |
DPOGS207435PA |
| D. melanogaster |
FBgn0000210 |
| P. humanus |
PHUM258420-PA |
| B. mori |
BGIBMGA009907-TA |
| N. vitripennis |
NV15002-PA |
| S. invicta |
SI2.2.0_14856 |