MidgeBase gene description page [Pn.03790]
Outline
| Gene ID | Pn.03790 |
| Type | Protein coding gene |
| Scaffold | PnScaf3121 |
| Start | 21024 |
| End | 23921 |
| Direction | - |
Sequence
Transcript: 1173 (bp)
ATGATCGGGGAGATGCAAACGAAGGCGGAGGAGAGGAGGTCGCGCTCGGTGACGGGAATTTCGGCGAAGGTCGACACGATGAGGCTGAACGACGAGGCCAACGGAAATGCCGAGATCGAAGCGAAGGCAAACGACAAAAACGGCAATGCAATAACGACGACCTCGACCGGGACTAAGAGCTACTCGAAACTTCGGCCGCTGGCGAGCTTGATGAGGAAAGTTGCGCCCGGCGCTGCAAATACGCTGCCAACGAAACTGCCGTCGACGATTGAGAGCGCCGATCAGGTGACGCAGGGCGACGAACTCAATCAGATCAAGTGCCGGCGCGCCGCTCATCACCAACGATCGCTGACGGCGTCGACGGCGACTCAGTCAGAATCGCTGCTGGCGAAACCTCGATCGTATCAAAATCGAGCAAAATCACAGTCGACCGCGCGTGCCTCTGACCAGGACGGGAAGAGCAGCAACACTGCAGCCGTAAACTCTTCAAACATCGCGAAGCCAATCAACAAAAGCGGAAACGGAACCGCAAGATTTGCGTACGTGGTGGTGCGAACGACGGCAAACAGCACAGTAATTTCGCCTTCTGCCGCGCCAATCCGCACGGAGGCCGTCAGCCACATTCCCGTCGTCGCGAGCAGCAACAAGCAACTCATCATCAGCAAGCCCTCAAAGGACGACGGCACGAAGCGAGCCTCGGTGCGGCGAGCGACTCTCAGCCGGTCCCGGCTGTCGCGGTCGCCGGTCAAGCCGCTCACGTCCAGCGCCGGCAGCGCGACTTTGACCAACCACACAATCACGACCACAACCGCGAGTTCGCAACAAAGCGACGACGCAGAAATTTCCGTCGCGAGGAGTCGAATCTGCAGGTTCTGCCCGCCGCAGGATGACTCGGCGGGCGTCGAAACGACACAGAAGCGCGGCAAGCGGTCACTGAGCGGCTCGCGGTTCTACGAGAAGAAAAATGTCCGCAGCAAAAAACAGATTCTGACGCCGGCCATCATGGTGCGAAGGCCGCACAAGGAAGTGTCGCTCGACCCGCCTCCGCTCGACGTCGCCGCAAGTACAAATCAATCGAGCGATAGCGCGCCGCCGCCGGCGAAGGAGCCGCCAAAATCGAGACTGAAGAAGCCCACCATTCGATCGCCGTCATCGCAAAAAATCGTCGCTTCT
Protein: 391 (aa)
MIGEMQTKAEERRSRSVTGISAKVDTMRLNDEANGNAEIEAKANDKNGNAITTTSTGTKSYSKLRPLASLMRKVAPGAANTLPTKLPSTIESADQVTQGDELNQIKCRRAAHHQRSLTASTATQSESLLAKPRSYQNRAKSQSTARASDQDGKSSNTAAVNSSNIAKPINKSGNGTARFAYVVVRTTANSTVISPSAAPIRTEAVSHIPVVASSNKQLIISKPSKDDGTKRASVRRATLSRSRLSRSPVKPLTSSAGSATLTNHTITTTTASSQQSDDAEISVARSRICRFCPPQDDSAGVETTQKRGKRSLSGSRFYEKKNVRSKKQILTPAIMVRRPHKEVSLDPPPLDVAASTNQSSDSAPPPAKEPPKSRLKKPTIRSPSSQKIVAS
| Type | Start | End | Length |
| CDS |
21027 |
21666 |
640 |
| CDS |
23184 |
23345 |
162 |
| CDS |
23551 |
23921 |
371 |
| intron |
21667 |
23183 |
1517 |
| intron |
23346 |
23550 |
205 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
NA |
No hit found |
NA |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes