MidgeBase gene description page [Pn.03728]
Outline
| Gene ID | Pn.03728 |
| Type | Protein coding gene |
| Scaffold | PnScaf3058 |
| Start | 12150 |
| End | 12892 |
| Direction | + |
Sequence
Transcript: 675 (bp)
ATGCTGAAATATTACTACGATCTGCTGTCGCAGCCATCGCGTGCGCTCTACATCTTCCTCAAAATAACCGGGACGCCTGTCGAGTACGTAAAGGTGAATTTGGGCAAGGCAGAGCACTTGACTGATGATTTCAAGGCAGTCAACCGATTCCAAAAAGTCCCATGCATCGTCGACAGCGACGGGTTCCAGCTGTCGGAGAGTGTTGCGATTTTCAGGTACCTGATGGAGACGAGACAGGGAATCGCTGACAACTGGTACCCGAAGGATCTGAAAACTCGCGCCCTCGTCGATGAGTATCTCGAGTATCAGCACAATGGCGTGCGTCTTCCCTGTGCCATGTATTTTCAAACAAAATGGCTGATCCCGAAATTCTCGGGAAAACCGGTGAACGAAGACCGTCTGAAGATGTTTAAGAAGCAAATGGAGCTCTCGCTCAGCACCCTCGAGAACGTGTGGCTTGTTAGCAAGGAGAAGGACTTTCTGGCAACCAATGAAATAAGCTTCGCCGACATTCTGGCGGCTTGCGAGCTCGAACAGCCTAGAATGGCTGGCTATAACACTTTTGAAGGAAGGCCGCGTTTGAATAGCTGGCATCAACGAGTGAAGGAGCTCACTAATCCTTATTATGACGAGGCTCATGCCATGGTTGAACGGGTCATCCAACAGTCGAAACTG
Protein: 225 (aa)
MLKYYYDLLSQPSRALYIFLKITGTPVEYVKVNLGKAEHLTDDFKAVNRFQKVPCIVDSDGFQLSESVAIFRYLMETRQGIADNWYPKDLKTRALVDEYLEYQHNGVRLPCAMYFQTKWLIPKFSGKPVNEDRLKMFKKQMELSLSTLENVWLVSKEKDFLATNEISFADILAACELEQPRMAGYNTFEGRPRLNSWHQRVKELTNPYYDEAHAMVERVIQQSKL
| Type | Start | End | Length |
| CDS |
12150 |
12364 |
215 |
| CDS |
12430 |
12889 |
460 |
| intron |
12365 |
12429 |
65 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
ADK66968 |
glutathione s-transferase [Chironomus riparius] |
6e-92 |
| InterPro |
IPR010987 |
Glutathione S-transferase, C-terminal-like |
|
| InterPro |
IPR004046 |
Glutathione S-transferase, C-terminal |
|
| InterPro |
IPR017933 |
Glutathione S-transferase/chloride channel, C-terminal |
|
| InterPro |
IPR012336 |
Thioredoxin-like fold |
|
| InterPro |
IPR004045 |
Glutathione S-transferase, N-terminal |
|
| Gene Ontology(MF) |
GO:0005515 |
protein binding |
|
| Pfam |
PF13409.1 |
Glutathione S-transferase, N-terminal domain |
3.8e-07 |
| Pfam |
PF13410.1 |
Glutathione S-transferase, C-terminal domain |
0.0049 |
| Pfam |
PF02798.15 |
Glutathione S-transferase, N-terminal domain |
3.8e-11 |
| Pfam |
PF13417.1 |
Glutathione S-transferase, N-terminal domain |
6.7e-09 |
| Pfam |
PF00043.20 |
Glutathione S-transferase, C-terminal domain |
1.2e-11 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| T. castaneum |
TC006215 |
| H. sapiens |
ENSP00000248935 |
| A. mellifera |
GB12047-PA |
| D. melanogaster |
FBgn0031117 |
| P. vanderplanki |
Pv.09841 |
| A. aegypti |
AAEL009017 |
| S. invicta |
SI2.2.0_04841 |
| C. quinquefasciatus |
CPIJ014052 |
| D. melanogaster |
FBgn0050000 |
| B. mori |
BGIBMGA009935-TA |
| D. plexippus |
DPOGS207703PA |
| H. melpomene |
HMEL008418-PA |
| C. quinquefasciatus |
CPIJ014051 |
| N. vitripennis |
NV12421-PA |
| N. vitripennis |
NV12420-PA |
| P. vanderplanki |
Pv.09840 |
| P. humanus |
PHUM454040-PA |
| D. melanogaster |
FBgn0050005 |
| A. gambiae |
AGAP000761 |