MidgeBase gene description page [Pn.03721]
Outline
| Gene ID | Pn.03721 |
| Type | Protein coding gene |
| Scaffold | PnScaf3056 |
| Start | 71373 |
| End | 73922 |
| Direction | + |
Sequence
Transcript: 2316 (bp)
ATGGAGGAATATAAGCTGTCTGCAGAGTTAACTGGCCACTCACTCGACGTGAGGACAGTGACATATGCAAATAACTGTGTTATATCGGGCTCGCGCGATAAAACAGCGAGAATATTCGAGAGAACCGACGATGGGAAATCGTTTAAACCAACTGAAGTATTATCGAATCACTCAAATTTCGTCTCGTCAGTATGTGTCCTCAACGAGGGAAAGTGGCTTGCGACTGCCTCGAACGACAAAACAATTTGTCTCTATTTATTCGGAATTGTGCAACCTTTTGCAACACTTAAAGAGCATACAGGAACTGTATGTGCGCTGGCCGAAGGTCTGCAGTCAAAGATCCTCATCAGCGGCAGCTGGGATCAAACGGCTAGAATCTGGACAAACCTCGACGTTGATAGCACATCGATTAAGCTCGAGGGTCATGAGGCGGCAGTTTGGGCCGTTTGCACGCTCAAGAACGGAAAGTATGCTACGGGAAGTGCCGACAAGAACATTTTCATTTGGAATCCAAAGGGCGAGAAGTTGGTTGTCTTAAAAGGCCACACTGACTGCGTTCGTGGACTCGCCGCACTGGATGACGGATCACTTTTGAGTGCTGCAAACGACGCCACAATTCGTCACTGGAGCGACACTTACGAGTGCATCAAAGAGTTTCACGGTCACGGCAACTACATTTATTCGATCGCTCTAAATCCGGCACTCGGCGACGCTTTTGTCACTGGAAGCGAGGACAGTACAATTCGATTGTGGTCGGTCAGCAAGGGAGCACTCGGTGAACCGCTTCATCTGCCCGCTCAGTCGGTTTGGGCCGTCGCTTGTGCAGACAACGGGGACATCATAACCGGATCGAGCGACGCTCTTGTTCGTGTGTTTACGAAGGATCCGGCGCGAGTCGCTCCGAACGACGCACTTGTGGCCTTTGAGACAGCAGTATCGACGAGAAAGCTCGAACAAAACGTAGAACTCGGTGGCGTAAAGGTCAACGACTTGCCGGGTCCTGAGTCACTTTTGCAAGAAGGAACGGAGGGACAAACGCGCCTCGTTCGCCAGCCAAACGGTAAAATCATGTGCTATCAGTGGACCAACAGCAAGTGGGAGTGCGTCGGCGATGTCATGGGAGCGACCGGAGGAACTCAGAAAACTTCGGGCAAACAGCTGCACGCCGGCAAGGAGTACGACTTTGTGTTCAACGTGGACATCGAGGACGGAAAGCCACCACTCAAGCTGCCTTTCAATGTGACGGAAGATCCGTGGCACGCGGCCCAAGCATTCATCCACAACAACGATTTGCCTCAGGTTTATCTCGAACAAGTTGCAAACTTCATTATCAAGAACGCAAATCTGGAGTCGATGCCGGTGGCAGTGAGCGAGGGCTTTGCCGATCCGTTCACTGGCGGTGGTCGCTATGTTCCTTCGTCAAACGGAAGTGCGCCAGCACCGGCAAATTCGAACGTCAATGTGAATTTCCGCGAGCGAAGCAGCGCGAACTCGGGAGTTGTGAATGTCGATCCCTTCACTGGCGGCTCAAGCTACTCCTCTGGCAAGCGCGACTTGATTGTTCAAAAGCATATTCCGTTGTTGACCATGACAACATTCGACTCTTACGATGGCTCGAAAATCATCGCCAAACTCAAAGAGTTCAACTCGCAACTGGGCGATGAGAGTCTTAAAGTGAGCGATTCGCAAATCGAAAGCATCAATCAACTGCTCACAGGCTCAGAAGTCAGCGAAGAGGCGCTCGCCAATTTCCGAAAATTGATGGAATGGCCCAACGAAAAACTCTTCCCGCTCCTCGACATTCTGCGTCTCGCCGTTCGCAACAAAATGACTTGCGAGAAGCTTATAGCCATCGACTATGTCATCGAAAAGTTGAGCTCAACAGCGCCGAATCAATTGATGGCGATCAGAACACTCAGCAACATGCTCACGCACGAGTTCGGAAAGAATATCGTCGAAACTAGACTAAATGAAATTTGCGAGGGAATCTCAAACATTTCGCAAGGAACGGTCAATCTTCAAAATGCTATCGGCACGTTCTTCCTCAATCAGTCGATTTTGCAAAAGGACGTGAAATCGGAAGAAGTTTCCACAATTTTAGCACTTGGCTTGCTGCGAGCAATCGAGTGGATCAGCGATCCTGAGGCAACATTCAAGGCTTATGCTGCAATGGGAAATTTAGTTGTCTACAATCCGTCGGCCTCGGTCACAATATTCAAGGCGGCAGACACACTGAGGAACTCATTGGAACGCAACAGAGGTGCTCAGTACGAAAAGCTGGCTGAAATCTCGGCGGAAATGACTGAAAAATTGCTT
Protein: 772 (aa)
MEEYKLSAELTGHSLDVRTVTYANNCVISGSRDKTARIFERTDDGKSFKPTEVLSNHSNFVSSVCVLNEGKWLATASNDKTICLYLFGIVQPFATLKEHTGTVCALAEGLQSKILISGSWDQTARIWTNLDVDSTSIKLEGHEAAVWAVCTLKNGKYATGSADKNIFIWNPKGEKLVVLKGHTDCVRGLAALDDGSLLSAANDATIRHWSDTYECIKEFHGHGNYIYSIALNPALGDAFVTGSEDSTIRLWSVSKGALGEPLHLPAQSVWAVACADNGDIITGSSDALVRVFTKDPARVAPNDALVAFETAVSTRKLEQNVELGGVKVNDLPGPESLLQEGTEGQTRLVRQPNGKIMCYQWTNSKWECVGDVMGATGGTQKTSGKQLHAGKEYDFVFNVDIEDGKPPLKLPFNVTEDPWHAAQAFIHNNDLPQVYLEQVANFIIKNANLESMPVAVSEGFADPFTGGGRYVPSSNGSAPAPANSNVNVNFRERSSANSGVVNVDPFTGGSSYSSGKRDLIVQKHIPLLTMTTFDSYDGSKIIAKLKEFNSQLGDESLKVSDSQIESINQLLTGSEVSEEALANFRKLMEWPNEKLFPLLDILRLAVRNKMTCEKLIAIDYVIEKLSSTAPNQLMAIRTLSNMLTHEFGKNIVETRLNEICEGISNISQGTVNLQNAIGTFFLNQSILQKDVKSEEVSTILALGLLRAIEWISDPEATFKAYAAMGNLVVYNPSASVTIFKAADTLRNSLERNRGAQYEKLAEISAEMTEKLL
| Type | Start | End | Length |
| CDS |
71373 |
71506 |
134 |
| CDS |
71576 |
72259 |
684 |
| CDS |
72422 |
73919 |
1498 |
| intron |
71507 |
71575 |
69 |
| intron |
72260 |
72421 |
162 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001842071 |
phospholipase A-2-activating protein [Culex quinquefasciatus] gb|EDS37609.1| phospholipase A-2-activating protein [Culex quinquefasciatus] |
0.0 |
| InterPro |
IPR015155 |
PLAA family ubiquitin binding, PFU |
|
| InterPro |
IPR017986 |
WD40-repeat-containing domain |
|
| InterPro |
IPR015943 |
WD40/YVTN repeat-like-containing domain |
|
| InterPro |
IPR001680 |
WD40 repeat |
|
| InterPro |
IPR013535 |
PUL |
|
| InterPro |
IPR020472 |
G-protein beta WD-40 repeat |
|
| Gene Ontology(MF) |
GO:0005515 |
protein binding |
|
| Pfam |
PF00400.27 |
WD domain, G-beta repeat |
7.3e-47 |
| Pfam |
PF03135.9 |
CagE, TrbE, VirB family, component of type IV transporter system |
0.0082 |
| Pfam |
PF08324.6 |
PUL domain |
1.5e-35 |
| Pfam |
PF09070.6 |
PFU (PLAA family ubiquitin binding) |
2.6e-41 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| H. melpomene |
HMEL010701-PA |
| P. humanus |
PHUM047800-PA |
| A. mellifera |
GB14172-PA |
| D. melanogaster |
FBgn0024314 |
| A. aegypti |
AAEL006677 |
| A. gambiae |
AGAP008620 |
| H. sapiens |
ENSP00000430447 |
| P. vanderplanki |
Pv.13718 |
| T. castaneum |
TC001920 |
| N. vitripennis |
NV10159-PA |
| D. plexippus |
DPOGS210122PA |
| H. sapiens |
ENSP00000428111 |
| H. sapiens |
ENSP00000380460 |
| N. vitripennis |
NV10160-PA |
| M. musculus |
ENSMUSG00000028577 |
| C. quinquefasciatus |
CPIJ000401 |
| B. mori |
BGIBMGA000229-TA |
| B. mori |
BGIBMGA000230-TA |
| H. sapiens |
ENSP00000429372 |