MidgeBase gene description page [Pn.03711]
Outline
| Gene ID | Pn.03711 |
| Type | Protein coding gene |
| Scaffold | PnScaf3047 |
| Start | 3028 |
| End | 4553 |
| Direction | - |
Sequence
Transcript: 1032 (bp)
ATGGTGGTCGCGAGGACAAAGGATGGCGCCCGCGAGGAGGACTTGCTGATTCTCGAGTTCAAGCCCATCGGCAGAGGAGCCTTCGGGCAGGTTTTCTCGGCCAAAGTAAAGGGCGCCCAGACGAACGAGAAGGTGGCCATAAAGCAGACACCGATCCACAAGCTGATGCCGACACGCGAGCTCGAAATCCTCAAGAAACTCGGCGATCACGCCAACATCATCAAGCTCAAGTTCTACTTCTACGAGAGCGTCACCGGCGAAGATGACCTCCGCACGGAGAATCTCGTGCTGGAGCTGTTCCCGCTCGACCTCTACAGCTACCAAAGGCAGCTCGCCAAGCAGGGCCAGCAGATGGCTGCGCTCCAGCTCAAACTGTTCTCCTACCAGCTGTTTCGGGCTGTCGGCTACTTGGGCTCGAAAAAGATTTGCCATCGCGACATCAAGCCGCACAACATTCTGGTCAACTGCGAGTCGAGCGAGCTGAAGCTCTGCGACTTTGGCTGTGCTAAGCAGCTGACCGAGGACGGCATCAGCACCACCTATGTCGCGACCAGGTTCTACCGCGCGCCCGAAATTCTGCTCGGCTCCAGCCACTACACTTGCAAGATTGACATATGGTCGATTGGCTGCGTCATGGCCGAAATGACAAACGGAAGGGTTCTGTTCAAGGGTGACTCCAACTACGAGATGTTCAACATGGTCACAAGGGTCTTGGGCACTCCCACAAAGCTCCAAATGACCTCCATGAAGCCGACCATGAAGGGACACATTCCGCACATCGACAACGGGCTTAACTGGCCACGAAACTTGATCAAAAAAGCGCTGCCCCTCCAGCTAGACCTGCTCTCCAAAGTGCTGCAGTACAATCCAAAAATGAGACCAAGTGGCTACGAAGCTCTGACGCACGGATTTTTCGATGAGCTGAGGATGAGCGACTGCAGAAGTTTTCCTCCTCTCTTCGACTTTTCCGGCGAAGAATTGTCGGCGATGGACGAGTGTATCGAGGTCAAGCTGCGGCCTTGTGAACTTTAC
Protein: 344 (aa)
MVVARTKDGAREEDLLILEFKPIGRGAFGQVFSAKVKGAQTNEKVAIKQTPIHKLMPTRELEILKKLGDHANIIKLKFYFYESVTGEDDLRTENLVLELFPLDLYSYQRQLAKQGQQMAALQLKLFSYQLFRAVGYLGSKKICHRDIKPHNILVNCESSELKLCDFGCAKQLTEDGISTTYVATRFYRAPEILLGSSHYTCKIDIWSIGCVMAEMTNGRVLFKGDSNYEMFNMVTRVLGTPTKLQMTSMKPTMKGHIPHIDNGLNWPRNLIKKALPLQLDLLSKVLQYNPKMRPSGYEALTHGFFDELRMSDCRSFPPLFDFSGEELSAMDECIEVKLRPCELY
| Type | Start | End | Length |
| CDS |
3031 |
3452 |
422 |
| CDS |
3944 |
4553 |
610 |
| intron |
3453 |
3943 |
491 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
ADO16568 |
GSK3 [Amphimedon queenslandica] |
2e-69 |
| InterPro |
IPR017441 |
Protein kinase, ATP binding site |
|
| InterPro |
IPR000719 |
Protein kinase, catalytic domain |
|
| InterPro |
IPR002290 |
Serine/threonine- / dual-specificity protein kinase, catalytic domain |
|
| InterPro |
IPR020635 |
Tyrosine-protein kinase, catalytic domain |
|
| InterPro |
IPR011009 |
Protein kinase-like domain |
|
| InterPro |
IPR008271 |
Serine/threonine-protein kinase, active site |
|
| Gene Ontology(BP) |
GO:0006468 |
protein phosphorylation |
|
| Gene Ontology(MF) |
GO:0004713 |
protein tyrosine kinase activity |
|
| Gene Ontology(MF) |
GO:0004674 |
protein serine/threonine kinase activity |
|
| Gene Ontology(MF) |
GO:0005524 |
ATP binding |
|
| Gene Ontology(MF) |
GO:0004672 |
protein kinase activity |
|
| Gene Ontology(MF) |
GO:0016772 |
transferase activity, transferring phosphorus-containing groups |
|
| Pfam |
PF00069.20 |
Protein kinase domain |
2.2e-58 |
| Pfam |
PF06293.9 |
Lipopolysaccharide kinase (Kdo/WaaP) family |
0.11 |
| Pfam |
PF01636.18 |
Phosphotransferase enzyme family |
0.0038 |
| Pfam |
PF01633.15 |
Choline/ethanolamine kinase |
0.0095 |
| Pfam |
PF07714.12 |
Protein tyrosine kinase |
7.3e-30 |
| Pfam |
PF03109.11 |
ABC1 family |
0.013 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| P. vanderplanki |
Pv.02024 |