MidgeBase gene description page [Pn.03690]
Outline
| Gene ID | Pn.03690 |
| Type | Protein coding gene |
| Scaffold | PnScaf3007 |
| Start | 67647 |
| End | 75094 |
| Direction | - |
Sequence
Transcript: 5931 (bp)
ATGGTCATCAAGAAGCCCAAGAAGATAAAGACCTCGGTGGAGGAGGCAGAAGCTTCCTTCACGAAGACAATCGAGCAGCCCGTGGAAGAGGAGCCGATTGTCGAGGAGATTTACGAGGAGGAGCCTGAAGAAACGGAAGAGTTTGTGTTTAAGCGCAAGCCAAAGCCTCGACCTCTCCAGTACGAGGAGCACGAGGCAGAGGTGACCATCAAGAAGCTGAAGAAGCCTCGCAAGCGTCCAGAATTCCCCGAATACTCCGAGCCCGAAAATGTCACGTTCCGACCGAAACGAACGACTCACAAGGAGGACGTCGAGCAGGAGTTCAAAATTCAGCTCGATTCCTACCAAGAGGAGGAGATTTCGATGTCGGGCAAGGTGAAGCTGAAGAAGCCCAAGCCAGTGTACTTCGAGGACTCTAGCGAGCACAACATCCGAATCATCCAAGAGGTCGAGGACGAAGGTCCGATCATCGAGGAGATTATCGATGAGGGCAGCGAGCCGGAGGACACGATGTACGATGTCGATGAGCCGGATGAGTTCTCCGACAAGGAGGCGCTGCCCGACGAAGAGGAGGACGTCCCCGAAGATGTCTACGTGAAATTGAAGCGAAGAAAGCACAGACCGCCGTACAAGGTTCAGGACTACGAGGAGGAGTCCATTTCCTTGGGCTTGCCGCGCAAGAAGCGCTCAAAGGTATCGTCATACGACGAAGACTCTCTGCAGTTGCGCTTGAAGCGCCGCTCCTCGGGACGCAAGTACATGGAAGAGGAGAACTCGCTGAGCATCACGCGAGAGCTTCGCGAGGAGGACCTGATGGTGTCGATGTGTACCGTGGCGTCGGACAATGAGGACACGCTGAACCTCGTCGAGGGCGAGAAGGTCTACGTCATGGATCGTTACAATGCCGACTGGTGGTTCATCAGGAAGCAACTGACCAACGAGAAGGGCTGGACAGAGTCTCACAACCTCATGGACGCTGTCAGCTACACTCACTACGTCCAGAAGAAGCTCAACGAGAAAATCGACAAGCTGCCCGTCATCGAGAAGCCCGGACCCAACGAAAAATCGTTTGCGCCGCGCTTCATCGAGAAGCTGCAGCCGATCCACACGCCCGAGGGCTACACCATTCATTTCGAGTGCAAGGTCGAGGGCTCGCCCCGTCCTCAAATCACGTGGTTCAGACAAACGCAAATCATTTTGCCGTCGCAAGACTTCCAGATCTACTACGACGACGACGACGTGGCGACCCTCATCATCCGCGAGGTCTTCCCGGAGGATGCCGGCACTTTCACGTGCGTCGCCAAGAACGCCGCCGGTTTTGCGTCGAGCACCACGGAGCTGACGGTCGAGTATCACTCGGATCACGCGTCCGAGATGACGTCGCGACGCAGTCAATCGCGCGAGTCCTCTCTCGCCGATATCCTCGACGGCGTACCGCCGATCTTCTCGAAGAAGCCCAAGGTCAAGTGCGTCGACGAGGGCTCGAACGTCCTCATCGACTGCCGCCTGGTGGCGGTGCCGAAGCCCACAATCAAGTGGTACTTCCAGGGCAAGGAGGTGGACACGTCGCAGAACGTCAAGGTCGTGACCAAGTCGGAGCACCACATGTACTGCACGGTCATGCAAATCACGAATGTGACGAAGAAGCAGGAGGGCAAATACCGGGTCGTCGCCTCGAATGGCGTGGGCGAGACGGTGCTTCCGATCAAGCTCAAGGTGCGAACCGGCGAGAAGGAGAAGCCGGAGATCCTCGAGCCGCTGAAGAACAAGACAATCAAGGAGGGCGACACGGTGACGTTCACGACGCAGGTCACCGGAAATCCGACGCCCAAAGTCCAGTGGTTCAAGAACGGCGACGAGATCAAGGAAAGCACCAAGGTGGACAAGGACACGTACTCACTGACAGTTGTGACGACGAGCGAGAACGACAGCGGTGACTACACGGTGAAGGCGACCAATCCACTCGGCACCGCCTTCTCCGGGTGCACGCTAACTGTCGAGGAGACCGCCGCGCACTTCGAGCCGCCGATGTTCACGGAGCGCTTCGAGGAGGCGATTGTGAAGCAGAACGAGACGATCCGGCTGACGGCGAAGGTCACCGGCATGCCGCGTCCCGATGTCACATGGCTGCGCAACAACAAGCCGCTCCAGCCGTCCGAACGCATCATCTCGGAGTACGACGGCGAGAGCATCACACTCACGATCACGCGCGCCGACTCAGAGACGGATTCGGGCGACTACAAGTGCATCGCGAGCAACATCGTGGGCAAGGCGTCGCACGGCGCAAAGGTCCTCATCGACGTCGACAAGGTGACGTTCACGAAGCCACTGCACAAGACGTACACCGTCGAGGAGAACAAGACAACGACGCTCGAGTGCGAGACGTCGCACTCGGTGCCGACCAGGTGGTACCACAACGACAAGGAGCTCACCGGCATGGACCATCGCGTGATTGTGCACGAGGCACGCACGCACAAGCTCATCGTGAAGTCGGCGACGTTCGAGGACGCAGGCTTCTACAAGTGCACCGTGAAGGAGCAGCTGACGGACGCGGAGCTGCGTGTGACCGAGGCCAAGCCCGAGTTCGTGCGCAAGCTCGACGACATCGAGTCCAACGAGCTGGAGACGGTCGTGCTGGAGGTGGAGATCACCTCGGAGACGGCGACCGTCGCCTGGTACAAGGACGGCGAGGAGATCAAGCCCAAGCCCGGCAAGTTCGAGATGGTCAAGAGCGGAAAGATCCACCAGCTGGTGGTGCGTGAGGCGACAGTGTACGACGAGGGCGAGTACACGTGCGTGCTGGCCGACCAAGAGTGCTCCGGCGACGTGACGGTGATCGAGCTGCCGCCGAAGCTCCTCTACGACCTCGAGAACATCACGATCTCGCAAGGCGAGAAGGCGATCTTCGAGGTGGAGTTGACGAAGGGCGACGCCCTCGTCAAGTGGTTCAAGAACGGCGAGGAGATTCTGTTCTCCGATCACGTCCAGCTCCGCATCGATGGCAAGAAGCAGAAGCTGAAGATCTACGATGCCCTGCTCGAGGACGCCGGCGAGTACTCGTGCATGGTCGCCGACCAGATCTCGTCGGCGACGCTCACCGTCGAGAAGCCGCTGGTGGAGTTTGTGAAGCGCCTGCCCGACATCACGCTCGTCACCAAGGGCAACGAGATCACGTTTGTGGTCGAGTTGTCGCAGCCCGATGTCGCCGTCGAGTGGTTCAAGAACAACGAGCCGATCCGGCCGTCCGAGAAGTACACGATCATCGACGAGGGCGCGATCAAGAAACTCATTCTGCACCGTGCCGAGGAGACGGACGCCACGCAGTACACGGTCGTTGCCGAAAACGTCAAGTCGACGACCAAGCTGAAGGTCGAAATCATCAAGTCCGCGCCGGTGATTGCACTCGAGGACCTCAACAAAACATATCGCGTGAAGGAGAACGACGAGGTGACCTTCATCGTGAAGTTCAATGCAACGCCCAAGCCCGACTGCGAATGGACCGTCTCGGAGAGGATCATCAAGAAGTCCGACCGACACGAGCCTCGCGTCAACGACCAGTCGGCTAGCCTGACCATCAAGAGAATCGTTGAGACTGACGCCGGTGACTACACCGTGAAGCTGAGGAATGTCGTTGGCGAGGCCGAAACATCGCTCAGAGTCATCTACATGAAGCAACCGTCACAGCCAGGATCGCCGGAGCCGGTCGAGTTGACCGACGACTCCATCACGCTGTTCTGGCACGCACCAAGCGACGACGGCAACTGCGAAATCACCGAATACATTCTCGAGTACCAGGAGACGACCGTGGAAAAGACGTGGAAGAAGATCACAAAGATCACCGACACGACATACCAGCTCACCGAGCTGCGCAAGGACACCGAGATGACGTTCCGCGTAACGGCCGTCAACGAGATCGGACCGAGTTTGCCGTCGGAGCCGTCGAGCGCGAAAATCTCGAAGCCCGTGACGAAGGAGCCGCCGACGTTCACCGAGTCGCTCAAGGACACAACGATCGGCCTCAGCAAGTCGCTGACGCTATCGTGCGTGGTGGGCGGCGTGCCAATTCCAGAAATCATGTGGTACAAAGACGACCAGCCCTTCGCCTCGAAGTTCGTCACATACGAGAGTCGCATCGCGAAGTACACGATCGAGTCGACGACCGAGACGACGGCCGCCACGTACAAGTGCGTCGCGACCAACGAGATGGGCGAGGCGACGACGACGTGCAACGTCCTCGTGCAGGAGAAGCCCGTGATTACGATCGACGAGAAGCTGCTGTCGCAGAACATGCGCGTGCAGTCCTCGTACGAGGTGACGGCCTCGATCGTCGGCTATCCTGTGCCGAAGGTGCAATGGTTCAAAGACAATATCAAGATCGACACGAACGAGGAGTTCACGATCGAGACAACAAAGACGACGTCGCGGCTGTTTATCCGCAGCATCGAGCGACACCACAGCGGAAAGTTCACGGTGAAGGCGAAGAACTCGGCGGGCACGGCCGTTGTCGACCTGTCGGTTACGGTAATCGACAAGCCGAGCAAGCCCGAGGGCCCGCTGCTGTTCCGCGAGATCAGCGACGAGGCTGTCGTGCTCGAGTGGCAAGCACCGAGCGACGACGGTGGCCTCGACATCCAGCAGTACTCGATCGAGAAGTGCGACCCCAACCAGAAGGCGTGGATCAAGATCGCAGTGGTCGATCGCAACATCGAGTCGTACTGCATCCAGAATCTTACCGAAAATGCACAGTATTTGTTCCGCGTCATTGCACGCAATCCTATCGGCAGCTCCGAGCCGCTCGAGAGCGAACCCGTCACGGTGAAGCGAGTGGCTGAGCCACCGTCGCCGCCGCGCGGACCGATCGAAATTTCCGGCATGACTGACACATCCTTCACGCTCACGTGGAAGCCGTCGGAGAAGGACGGCGGCTCGCGCATCATCGAATACATCATTGAGATCCGCGAGAGCAACAAGAAGGTGTGGCGCATGCTCAGCATCACGTCCTTCGATCAGACGAGCATCTTTGTACAGAAGCTCGTCAAGGACCAAGGATATCACTTTAGGATAACGGCGCGCAACAAAATCGGCACCAGCGATCCTCTCATCACCGACGAGAAGATCATCGCTGGACGACAAATCACGCCACCATCGCCGCCGCAGAACTTGCAAGTCACGACGGTGACGAGCAAGAGTGTGACAATTCAATGGGAGACGCCGGCCAGTAACGGCGGCACCGAAATTACCAGCTACATAATCGAGAAGCATTTGACAAAATCGTCGCAGTGGAGTCGCGTGGCAACGCTCGACTCCTACTGCCTCAGCTACTGCATCGATAATCTTAAGGAGACGATGGATCTGAACTTCAGAGTGTCGGCCGAGAATGCAATCGGTGTCAGTGCACCGTCATACACTGAGCCCGTGACGCTCAAGACGCATGCAACCGTTCCCTCGCCGCCAACCGGACCTTTGGAGATTCGCTTGATTGGATCGAGCACGCACGTCGCCGAGTGGGGAGTGCCCGAGAGCGACGGCGGTGCTCCGCTTCTGGGCTACAACATAGCCATTCGTGATGTAAAGAAGACGATGTGGATCGAGGTAGGCCGCTGCAAGGAGGATGTGCAGAAGTTCAACATTCGGGACCTACAGGACGGCCACAAATACATGATCCGCATCTACGCGCGCAACGAAATTGGCCTGAGTGACCCGCTGGAGTCTGAGGAACCGTATGAAGTTCTTCACGGCACAGGCCACGACACGCACGACGAACCGCGATCACAGATTACCGAGCCGACCGGATGGAGTACGGAGAATACTTCATCGTGGATGCGTGAGCACAACATGGACGCAGACATCAGCTCGTACGCGCGAGCCAAGCTGCTGCGTCGAGACGAATACTTCTTCAAGATTTGGCATTACGCGAAGAAGCTTTTCAAA
Protein: 1977 (aa)
MVIKKPKKIKTSVEEAEASFTKTIEQPVEEEPIVEEIYEEEPEETEEFVFKRKPKPRPLQYEEHEAEVTIKKLKKPRKRPEFPEYSEPENVTFRPKRTTHKEDVEQEFKIQLDSYQEEEISMSGKVKLKKPKPVYFEDSSEHNIRIIQEVEDEGPIIEEIIDEGSEPEDTMYDVDEPDEFSDKEALPDEEEDVPEDVYVKLKRRKHRPPYKVQDYEEESISLGLPRKKRSKVSSYDEDSLQLRLKRRSSGRKYMEEENSLSITRELREEDLMVSMCTVASDNEDTLNLVEGEKVYVMDRYNADWWFIRKQLTNEKGWTESHNLMDAVSYTHYVQKKLNEKIDKLPVIEKPGPNEKSFAPRFIEKLQPIHTPEGYTIHFECKVEGSPRPQITWFRQTQIILPSQDFQIYYDDDDVATLIIREVFPEDAGTFTCVAKNAAGFASSTTELTVEYHSDHASEMTSRRSQSRESSLADILDGVPPIFSKKPKVKCVDEGSNVLIDCRLVAVPKPTIKWYFQGKEVDTSQNVKVVTKSEHHMYCTVMQITNVTKKQEGKYRVVASNGVGETVLPIKLKVRTGEKEKPEILEPLKNKTIKEGDTVTFTTQVTGNPTPKVQWFKNGDEIKESTKVDKDTYSLTVVTTSENDSGDYTVKATNPLGTAFSGCTLTVEETAAHFEPPMFTERFEEAIVKQNETIRLTAKVTGMPRPDVTWLRNNKPLQPSERIISEYDGESITLTITRADSETDSGDYKCIASNIVGKASHGAKVLIDVDKVTFTKPLHKTYTVEENKTTTLECETSHSVPTRWYHNDKELTGMDHRVIVHEARTHKLIVKSATFEDAGFYKCTVKEQLTDAELRVTEAKPEFVRKLDDIESNELETVVLEVEITSETATVAWYKDGEEIKPKPGKFEMVKSGKIHQLVVREATVYDEGEYTCVLADQECSGDVTVIELPPKLLYDLENITISQGEKAIFEVELTKGDALVKWFKNGEEILFSDHVQLRIDGKKQKLKIYDALLEDAGEYSCMVADQISSATLTVEKPLVEFVKRLPDITLVTKGNEITFVVELSQPDVAVEWFKNNEPIRPSEKYTIIDEGAIKKLILHRAEETDATQYTVVAENVKSTTKLKVEIIKSAPVIALEDLNKTYRVKENDEVTFIVKFNATPKPDCEWTVSERIIKKSDRHEPRVNDQSASLTIKRIVETDAGDYTVKLRNVVGEAETSLRVIYMKQPSQPGSPEPVELTDDSITLFWHAPSDDGNCEITEYILEYQETTVEKTWKKITKITDTTYQLTELRKDTEMTFRVTAVNEIGPSLPSEPSSAKISKPVTKEPPTFTESLKDTTIGLSKSLTLSCVVGGVPIPEIMWYKDDQPFASKFVTYESRIAKYTIESTTETTAATYKCVATNEMGEATTTCNVLVQEKPVITIDEKLLSQNMRVQSSYEVTASIVGYPVPKVQWFKDNIKIDTNEEFTIETTKTTSRLFIRSIERHHSGKFTVKAKNSAGTAVVDLSVTVIDKPSKPEGPLLFREISDEAVVLEWQAPSDDGGLDIQQYSIEKCDPNQKAWIKIAVVDRNIESYCIQNLTENAQYLFRVIARNPIGSSEPLESEPVTVKRVAEPPSPPRGPIEISGMTDTSFTLTWKPSEKDGGSRIIEYIIEIRESNKKVWRMLSITSFDQTSIFVQKLVKDQGYHFRITARNKIGTSDPLITDEKIIAGRQITPPSPPQNLQVTTVTSKSVTIQWETPASNGGTEITSYIIEKHLTKSSQWSRVATLDSYCLSYCIDNLKETMDLNFRVSAENAIGVSAPSYTEPVTLKTHATVPSPPTGPLEIRLIGSSTHVAEWGVPESDGGAPLLGYNIAIRDVKKTMWIEVGRCKEDVQKFNIRDLQDGHKYMIRIYARNEIGLSDPLESEEPYEVLHGTGHDTHDEPRSQITEPTGWSTENTSSWMREHNMDADISSYARAKLLRRDEYFFKIWHYAKKLFK
| Type | Start | End | Length |
| CDS |
67650 |
67837 |
188 |
| CDS |
67905 |
68210 |
306 |
| CDS |
68388 |
68687 |
300 |
| CDS |
69171 |
70637 |
1467 |
| CDS |
70978 |
73602 |
2625 |
| CDS |
73779 |
74057 |
279 |
| CDS |
74329 |
75094 |
766 |
| intron |
67838 |
67904 |
67 |
| intron |
68211 |
68387 |
177 |
| intron |
68688 |
69170 |
483 |
| intron |
70638 |
70977 |
340 |
| intron |
73603 |
73778 |
176 |
| intron |
74058 |
74328 |
271 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001650719 |
myosin light chain kinase [Aedes aegypti] gb|EAT43208.1| myosin light chain kinase [Aedes aegypti] |
0.0 |
| InterPro |
IPR003598 |
Immunoglobulin subtype 2 |
|
| InterPro |
IPR007110 |
Immunoglobulin-like |
|
| InterPro |
IPR001452 |
Src homology-3 domain |
|
| InterPro |
IPR013783 |
Immunoglobulin-like fold |
|
| InterPro |
IPR003599 |
Immunoglobulin subtype |
|
| InterPro |
IPR003961 |
Fibronectin, type III |
|
| InterPro |
IPR013098 |
Immunoglobulin I-set |
|
| Gene Ontology(MF) |
GO:0005515 |
protein binding |
|
| Pfam |
PF00047.20 |
Immunoglobulin domain |
6.1e-55 |
| Pfam |
PF07653.12 |
Variant SH3 domain |
0.007 |
| Pfam |
PF08205.7 |
CD80-like C2-set immunoglobulin domain |
1.4e-18 |
| Pfam |
PF07679.11 |
Immunoglobulin I-set domain |
2.3e-172 |
| Pfam |
PF00018.23 |
SH3 domain |
1.2e-05 |
| Pfam |
PF02588.10 |
Uncharacterized BCR, YitT family COG1284 |
0.47 |
| Pfam |
PF07654.10 |
Immunoglobulin C1-set domain |
1.6e-05 |
| Pfam |
PF00041.16 |
Fibronectin type III domain |
5.2e-66 |
| Pfam |
PF13927.1 |
Immunoglobulin domain |
1.2e-46 |
| Pfam |
PF13895.1 |
Immunoglobulin domain |
5.1e-85 |
| Pfam |
PF07686.12 |
Immunoglobulin V-set domain |
5.6e-32 |
| Pfam |
PF14292.1 |
SusE outer membrane protein |
0.016 |
| Pfam |
PF11049.3 |
Glycoprotein K1 of Kaposi's sarcoma-associated herpes virus |
0.035 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
| Gene ID |
| Pn.06007 |
| Pn.14577 |
| Pn.13706 |
Orthologous genes
| Species |
Gene ID |
| M. musculus |
ENSMUSG00000051747 |
| S. invicta |
SI2.2.0_09294 |
| C. quinquefasciatus |
CPIJ006893 |
| S. invicta |
SI2.2.0_11325 |
| P. vanderplanki |
Pv.03591 |
| S. invicta |
SI2.2.0_05079 |
| S. invicta |
SI2.2.0_16483 |
| A. aegypti |
AAEL005319 |
| P. humanus |
PHUM540980-PA |
| A. aegypti |
AAEL005338 |
| N. vitripennis |
NV17131-PA |
| A. aegypti |
AAEL005324 |
| B. mori |
BGIBMGA000622-TA |
| P. humanus |
PHUM540970-PA |
| A. gambiae |
AGAP007563 |
| S. invicta |
SI2.2.0_12192 |
| P. vanderplanki |
Pv.10152 |
| A. mellifera |
GB14642-PA |
| T. castaneum |
TC030701 |
| B. mori |
BGIBMGA000624-TA |
| H. melpomene |
HMEL025057-PA |
| A. mellifera |
GB12411-PA |
| B. mori |
BGIBMGA000623-TA |
| D. plexippus |
DPOGS207167PA |
| D. melanogaster |
FBgn0086906 |
| A. aegypti |
AAEL005318 |
| C. quinquefasciatus |
CPIJ006894 |
| P. vanderplanki |
Pv.15539 |
| H. melpomene |
HMEL011562-PA |
| P. humanus |
PHUM541090-PA |