MidgeBase gene description page [Pn.03674]
Outline
| Gene ID | Pn.03674 |
| Type | Protein coding gene |
| Scaffold | PnScaf2988 |
| Start | 30326 |
| End | 32064 |
| Direction | - |
Sequence
Transcript: 1596 (bp)
ATGGTATCTGAAGAAGCTCCAACAGTCAAAGAGGTGCAGTCAAAAAACGCAGCGAAAAAACTCGCTTCGAAAGCTGAGAAAGCTGCGAAAAGAGCTGAAAAGACTGCTGCTGAAAAGAGACAAAAGGAGAATGTAGAAGAACCTGTGGGTGAGGACTATTCCAATGACAGATATGGACCGTCCAAAATGATTCAATCGTCTGAAAAGTATGCTGACAGAAAATTTGTGCCTCTCAATAAACTAAGCAGTTCTGATAGCTCAAAGCCAGTATGGGTTCGTGGACGTATTCACACTTCGCGCTGTAAAGGAAAGCAGTGTTTTATTGTCTTACGTCAGCAATCCAACACCGTTCAAGTACTAATATGCGTTAACGAAATCATCTCTAAACAGATGGTGAAATTTAGTGGATCAATCCCTCGCGAGAGCATTGTCGACATTGAAGCGAATATCGTTCCTGTCGACCAAAAAATTGAAGCATGCACGGAACAAAATTTGGAATTGCACGGTCTGAGAATTTTTGTCATATCTCAAGCGAAACTGCAATTGCCCCTTCAAATCGAAGATGCGTCTCGGCCTGAAAAAAAAGATGACCCGGATAGCCTGACCATTCGGGTAAATCAAGACACCCGTCTAGACAATCGAGTCTTAGATCTTCGTACGCCGGCTAATCAAGCGATTTTTCGCCTCGAAGCAGGTGTTTGCAAATTATTCCGCGACATCCTAAGTAAGCAGGGCTTTGTCGAGATTCATACGCCTAAAATAATTTCTGCTGCGAGTGAGGGAGGTGCTAATGTCTTCACCGTGAGCTACTTCAAGGAATCTGCATATCTCGCTCAATCACCACAGCTATATAAGCAAATGGCGATAGCTGCCGATTTTGACCGCGTGTTCACTGTCGGTGCTGTTTTTCGTGCTGAGGATTCCAACACTCACCGGCATCTGACGGAGTTTGTTGGTCTCGATTTAGAGATGGCCTTCAAATATCATTATCATGAAGTGCTTGATACTATTGCAAACACGTTCACTGAAATGTTTAAAGGCTTACGCGATAATTACGCAAGCGAAATTGCTGCAGTGGGAAATCAATTCAATGTCGAACCTTTCAAATTTTTGGAGCCTCCATTACGACTAGAATTCCATCAAGCAGTTCAAATCTTGCGAGAAGCAGGAATCGAGATGGGTGACGAAGAAGATTTATCGACTCCCAATGAAAAACTCCTCGGTCGTTTAGTGAAAGCAAAATATGACACTGATTTTTATATACTAGATAAGTTTCCTCTTGCTATACGACCATTTTATACTATGCCAGATCCGAACAATCCTAAATATTCAAACTCGTACGATATGTTTATGCGCGGCGAGGAAATTCTTTCTGGCGCTCAGCGTATTCATGATCCTGAATATCTTGTTGAGCGCGCAAAACACCATGACATTGATATTTCCAAAATTGCTGCTTATATTGAAGCCTTCCGATTTGGATGTCCTCCACACGCCGGAGGAGGAATTGGAATGGAGCGTGTTGTCATGTTGTATCTAGGCTTGGATAATATCAGAAAAACTTCGATGTTCCCCCGTGATCCAAAGCGATTGACACCT
Protein: 532 (aa)
MVSEEAPTVKEVQSKNAAKKLASKAEKAAKRAEKTAAEKRQKENVEEPVGEDYSNDRYGPSKMIQSSEKYADRKFVPLNKLSSSDSSKPVWVRGRIHTSRCKGKQCFIVLRQQSNTVQVLICVNEIISKQMVKFSGSIPRESIVDIEANIVPVDQKIEACTEQNLELHGLRIFVISQAKLQLPLQIEDASRPEKKDDPDSLTIRVNQDTRLDNRVLDLRTPANQAIFRLEAGVCKLFRDILSKQGFVEIHTPKIISAASEGGANVFTVSYFKESAYLAQSPQLYKQMAIAADFDRVFTVGAVFRAEDSNTHRHLTEFVGLDLEMAFKYHYHEVLDTIANTFTEMFKGLRDNYASEIAAVGNQFNVEPFKFLEPPLRLEFHQAVQILREAGIEMGDEEDLSTPNEKLLGRLVKAKYDTDFYILDKFPLAIRPFYTMPDPNNPKYSNSYDMFMRGEEILSGAQRIHDPEYLVERAKHHDIDISKIAAYIEAFRFGCPPHAGGGIGMERVVMLYLGLDNIRKTSMFPRDPKRLTP
| Type | Start | End | Length |
| CDS |
30329 |
30489 |
161 |
| CDS |
30552 |
31576 |
1025 |
| CDS |
31655 |
32064 |
410 |
| intron |
30490 |
30551 |
62 |
| intron |
31577 |
31654 |
78 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001655895 |
aspartyl-tRNA synthetase [Aedes aegypti] gb|EAT46044.1| aspartyl-tRNA synthetase [Aedes aegypti] |
0.0 |
| InterPro |
IPR004523 |
Aspartyl-tRNA synthetase, archeal/eukaryotic-type |
|
| InterPro |
IPR012340 |
Nucleic acid-binding, OB-fold |
|
| InterPro |
IPR004365 |
Nucleic acid binding, OB-fold, tRNA/helicase-type |
|
| InterPro |
IPR002312 |
Aspartyl/Asparaginyl-tRNA synthetase, class IIb |
|
| InterPro |
IPR006195 |
Aminoacyl-tRNA synthetase, class II |
|
| InterPro |
IPR016027 |
Nucleic acid-binding, OB-fold-like |
|
| InterPro |
IPR004364 |
Aminoacyl-tRNA synthetase, class II (D/K/N) |
|
| InterPro |
IPR018150 |
Aminoacyl-tRNA synthetase, class II (D/K/N)-like |
|
| Gene Ontology(BP) |
GO:0006422 |
aspartyl-tRNA aminoacylation |
|
| Gene Ontology(BP) |
GO:0006418 |
tRNA aminoacylation for protein translation |
|
| Gene Ontology(CC) |
GO:0005737 |
cytoplasm |
|
| Gene Ontology(MF) |
GO:0005524 |
ATP binding |
|
| Gene Ontology(MF) |
GO:0000166 |
nucleotide binding |
|
| Gene Ontology(MF) |
GO:0004815 |
aspartate-tRNA ligase activity |
|
| Gene Ontology(MF) |
GO:0004812 |
aminoacyl-tRNA ligase activity |
|
| Gene Ontology(MF) |
GO:0003676 |
nucleic acid binding |
|
| Pfam |
PF01409.15 |
tRNA synthetases class II core domain (F) |
6.5e-05 |
| Pfam |
PF01336.20 |
OB-fold nucleic acid binding domain |
3.8e-06 |
| Pfam |
PF00152.15 |
tRNA synthetases class II (D, K and N) |
5.1e-81 |
| Pfam |
PF12569.3 |
NMDA receptor-regulated protein 1 |
3.1 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| T. castaneum |
TC002857 |
| A. gambiae |
AGAP005576 |
| B. mori |
BGIBMGA009794-TA |
| A. aegypti |
AAEL002748 |
| H. sapiens |
ENSP00000264161 |
| H. melpomene |
HMEL009339-PA |
| C. quinquefasciatus |
CPIJ019538 |
| A. aegypti |
AAEL011518 |
| P. vanderplanki |
Pv.07279 |
| P. humanus |
PHUM090410-PA |
| S. invicta |
SI2.2.0_00256 |
| D. plexippus |
DPOGS212525PA |
| N. vitripennis |
NV16908-PA |
| A. mellifera |
GB12647-PA |
| C. quinquefasciatus |
CPIJ015212 |
| D. melanogaster |
FBgn0002069 |
| H. sapiens |
ENSP00000444192 |