MidgeBase gene description page [Pn.03509]
Outline
| Gene ID | Pn.03509 |
| Type | Protein coding gene |
| Scaffold | PnScaf2915 |
| Start | 9609 |
| End | 14832 |
| Direction | - |
Sequence
Transcript: 3078 (bp)
ATGCCGCAATTTATAGGCTTCAGCGATCCCTACTGCATGCTCGGCATCACGTCGATGATGGGATGTCAGCCACCGCTCTCGCCTCAACCGGCAACGACGCCCCGCACACCGATGCTTCCCGACACCGGCTGCATGGATAGCCTGGAGTCTCCCGATAATAAATTACGCAAACACGGCAGCTTCCGATTGAGCTTCAAGCGCAAGAACCAACACCGCGACTCGATGGGACCGATGCCGGCGAAAATCATCAAGGCAACATCCGTGAAGCAACACACGCTCAGTCCCAAGTGGAATGAGAAATTTAAATTCGACGTTGATGACATTAACACTGAGCAATTACACCTTGACATTTGGGATCACGACGACGAGAGCAGCGTTATGGACGCCGTGTCGCGACTAAACGAGGTCAGGGGCGTTCGCGGTCTCGGACGGTTCTTCAAACAAGTCTGCCAGTCGGCGCGCCAAGGCTCCCAAGACGACTTCCTCGGCAGCATAAACATCCCGATTTCGGACATTCCGAGCACGGGCTTAGAGGGATGGTTTAAGCTCGAGGGTCGCAGCCATCGGAGCAATGTGCAGGGACGCATCCGTCTGAAGCTGTGGCTCTCGACACGCGACGACCACGGCCAGTCGGAGGACGACATTCTCGTCGAGATCCGCAAGCTCGAGCGTTGCTACGTGGTATTCATGCAGCACGAGCTCGCGACTCATGAGCCCACGTGGAGCTGGAGCGGCGACATCCAGGGCTCGGCCACAACCATCCTGCACCAGATGGCAGTGCAGGCGGACCTCTCAGAGCTGCAGTGCGCCATGGCGCGCTTCGTGGCCGTCATCACGCTCAACAACCGCACGCCGCTCGACCCGAAGTTCATTCACCGTGTCATGCTTGAACTCGACCGCTTCTGGATGCAGGTCTCGATGGACGGCCCGCTCGGCCACGAGCTCGAGCAGTGGCTCGCGAAGGCCATGTCACGATTCGTTGAAATTTCGCTCAACCAAATGCGCCGCCACCGCGACATCTTTCCCGCCCTCCATCCGCCGTCGCTCGTCCGACTCGAGTTTCTGCTGCGGTGTCTCGGCCTTCTCGGCTCGATGCGCGCCTTCCGTCAGGTCTGTCCCTTCAGCAAAGGCGTGCGCGGCGAAATTGTCAATTACTTGCGCAAGGGCTCCGTGCTGTGGGCACAGAATCAGCTGCGCGAAGCCGTTCGTCACGAAAACCCGCTCGTTCATTTCACCACCACGCTGTTGGCTGACCTACAGACCGGGCTGAGCTACTACCATCCGATCTTTGACAACACCAACGGAGTTCAGTACTTCAGTATCGTGTACAAGCAGTTCGACCAAATCCTAGCGGATGAGGTTTCGATGCGAATGGAGACGGGTCAGATAGCGGGCGCGCCGACAAATCAATATGCCGTTCTCGAGGGCCGCGAACAAATCGATACGCGGCCGTTCGAGCTGTATTTCGCCTTGCAGGAGTTTTCCGTGCTGAAGCAGCACCTGTCAGTTCAACCGCAGCCGCCGGAGAAGGCTTTGGGCATTCAGAACTATCATCTGTGGTTCGAATCAATCATTCAGCTGTGGGTGGCGGTGAGCAAGAGCAAGGCACTCAATCGCGTCCGCTCCGCCATCTCCATGGACGAGATCTGCGAGGGCGAGAAAATCGTGCGTCACAGCACGTCCTCCGTCGACATCGCGAGCGTCATTTACCAGATGAAGGAGTTCTGGAAATTGCTCGCGTGGCCCGACCCGAACTCGGCCATGCACTTCGAGGCGCAGTTCATTGACGCCGCGTGCGCCACGGCACTGCACTACAGCGACCTCGTGCACCAGAACCTCATCGACAGCGGATACTACGAGCAGCAGGGGCAGTTTCGCGTGAGCGACGAACTCTGCGTGACGGTGAACAATCTCGAGTATGTGAGACGGGCGCTTGCCGAATTTCGAGAAAACGACTTGACGCCGCAGCAACCGCATCCGCCGCTGCTGCTGCAGCAGCAGTCGCTTCCCATCAATCAACTCCAGCTGAATGTCATGAGCCTCGACAATATGCTTGAGAGCACGCTGCTGCAGCTCGAGCGGACGACCGAGCGCATCATGAGTCGCATTGCCGTCACGATGCAGGCGCCCATGCAGAAATCCGTCTTTCATCTGGCTTGGTCACCCGACTCCTTGCCCGCGGCGCAAGCAATCGTCCCACTGCTCGAGTACCTCGACCTCAACTTATCCGCTCTCAACAGCGCGCTTCTGACCAAGAATTTTCACCGTGCATTAAACATCATTTGGCTGCTGGTGCTCAACGAGCTCGCCGGCCAAATGGACACGGCCGGCGGCGAGAAGCCGGCCAACTTCCACGACCGTCTCTACGAGGCGCTGCAGATGCTCGTCGAGTTCATTCACGCCGAGGGACTCGGCCTCACGCACGAGACAATCAAGAACGAGGACTACTGGCGCGTGGAGCAGCGACTGCAGTATCACAAGAGCAACACCGAGCACCTCATCGACCTGTTCTACATGCAGCGGCTGCAGGAGCAAATTCGACTGCAAAACTCCACGGAGCCCGCACAGTACGGCATTCTTTCGGTGCGCGCCTACTTCAATCACGATTCGCTGTGCGTCGAAGTGCTACGTGCTCAGAACGTCATTCCGCTCGATCCCAACGGCTTCAGCGATCCGTTCGTTATCATTGAGTTGCTGCCGCGTCGAGTGTTCCCGCACACCGAGCAGCAGACACACGTGCACAAGAGAACACTCAATCCGGTTTTCGACGAATGTTTCGAGTTTGGCACAATAACGCTCGAGCAGTGCACGCAGGAGTGCGCCATGATTGGATTTACTGTGATGGACCACGATGTCATAACGGCAAATGACTTTGCCGGCGAAGCCTTCCTCTCGTTGAACAATATTCCCGGTGTTTCCGAGTGCGGCAGCATCGACAACTTCCACGGACTGAAGCCCATCGATCTGGTGCTCATGCAGCAAAAGGACAAACACCATCCGATTCTTCAAATTCTCGAGACCCGAACCACAGACAAACTTGCTCTCGACTTTGTGCGAAAGCAGAAAAGCCGAGTGACC
Protein: 1026 (aa)
MPQFIGFSDPYCMLGITSMMGCQPPLSPQPATTPRTPMLPDTGCMDSLESPDNKLRKHGSFRLSFKRKNQHRDSMGPMPAKIIKATSVKQHTLSPKWNEKFKFDVDDINTEQLHLDIWDHDDESSVMDAVSRLNEVRGVRGLGRFFKQVCQSARQGSQDDFLGSINIPISDIPSTGLEGWFKLEGRSHRSNVQGRIRLKLWLSTRDDHGQSEDDILVEIRKLERCYVVFMQHELATHEPTWSWSGDIQGSATTILHQMAVQADLSELQCAMARFVAVITLNNRTPLDPKFIHRVMLELDRFWMQVSMDGPLGHELEQWLAKAMSRFVEISLNQMRRHRDIFPALHPPSLVRLEFLLRCLGLLGSMRAFRQVCPFSKGVRGEIVNYLRKGSVLWAQNQLREAVRHENPLVHFTTTLLADLQTGLSYYHPIFDNTNGVQYFSIVYKQFDQILADEVSMRMETGQIAGAPTNQYAVLEGREQIDTRPFELYFALQEFSVLKQHLSVQPQPPEKALGIQNYHLWFESIIQLWVAVSKSKALNRVRSAISMDEICEGEKIVRHSTSSVDIASVIYQMKEFWKLLAWPDPNSAMHFEAQFIDAACATALHYSDLVHQNLIDSGYYEQQGQFRVSDELCVTVNNLEYVRRALAEFRENDLTPQQPHPPLLLQQQSLPINQLQLNVMSLDNMLESTLLQLERTTERIMSRIAVTMQAPMQKSVFHLAWSPDSLPAAQAIVPLLEYLDLNLSALNSALLTKNFHRALNIIWLLVLNELAGQMDTAGGEKPANFHDRLYEALQMLVEFIHAEGLGLTHETIKNEDYWRVEQRLQYHKSNTEHLIDLFYMQRLQEQIRLQNSTEPAQYGILSVRAYFNHDSLCVEVLRAQNVIPLDPNGFSDPFVIIELLPRRVFPHTEQQTHVHKRTLNPVFDECFEFGTITLEQCTQECAMIGFTVMDHDVITANDFAGEAFLSLNNIPGVSECGSIDNFHGLKPIDLVLMQQKDKHHPILQILETRTTDKLALDFVRKQKSRVT
| Type | Start | End | Length |
| CDS |
9612 |
9697 |
86 |
| CDS |
9821 |
10067 |
247 |
| CDS |
10156 |
10746 |
591 |
| CDS |
11140 |
11946 |
807 |
| CDS |
12054 |
12105 |
52 |
| CDS |
12502 |
13286 |
785 |
| CDS |
13345 |
13546 |
202 |
| CDS |
13964 |
14255 |
292 |
| CDS |
14817 |
14832 |
16 |
| intron |
9698 |
9820 |
123 |
| intron |
10068 |
10155 |
88 |
| intron |
10747 |
11139 |
393 |
| intron |
11947 |
12053 |
107 |
| intron |
12106 |
12501 |
396 |
| intron |
13287 |
13344 |
58 |
| intron |
13547 |
13963 |
417 |
| intron |
14256 |
14816 |
561 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_315840 |
AGAP005816-PB [Anopheles gambiae str. PEST] gb|EAA11102.4| AGAP005816-PB [Anopheles gambiae str. PEST] |
0.0 |
| InterPro |
IPR014770 |
Munc13 homology 1 |
|
| InterPro |
IPR014772 |
Mammalian uncoordinated homology 13, domain 2 |
|
| InterPro |
IPR018029 |
C2 membrane targeting protein |
|
| InterPro |
IPR008973 |
C2 calcium/lipid-binding domain, CaLB |
|
| InterPro |
IPR019558 |
Mammalian uncoordinated homology 13, subgroup, domain 2 |
|
| InterPro |
IPR000008 |
C2 calcium-dependent membrane targeting |
|
| Gene Ontology(MF) |
GO:0005515 |
protein binding |
|
| Pfam |
PF10540.4 |
Munc13 (mammalian uncoordinated) homology domain |
1.5e-19 |
| Pfam |
PF00168.25 |
C2 domain |
5.1e-35 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| C. quinquefasciatus |
CPIJ007008 |
| T. castaneum |
TC002977 |
| H. sapiens |
ENSP00000458134 |
| P. humanus |
PHUM188690-PA |
| P. vanderplanki |
Pv.12931 |
| A. mellifera |
GB17246-PA |
| A. aegypti |
AAEL002724 |
| H. sapiens |
ENSP00000380626 |
| M. musculus |
ENSMUSG00000047507 |
| H. sapiens |
ENSP00000207549 |
| S. invicta |
SI2.2.0_80232 |
| M. musculus |
ENSMUSG00000057948 |
| H. sapiens |
ENSP00000466826 |
| D. plexippus |
DPOGS211656PA |
| A. gambiae |
AGAP005816 |
| H. melpomene |
HMEL006733-PA |
| D. melanogaster |
FBgn0035756 |
| H. sapiens |
ENSP00000388093 |
| H. melpomene |
HMEL004844-PA |
| B. mori |
BGIBMGA011704-TA |
| H. sapiens |
ENSP00000457644 |
| H. sapiens |
ENSP00000324510 |
| H. sapiens |
ENSP00000380625 |
| H. sapiens |
ENSP00000407242 |
| B. mori |
BGIBMGA011705-TA |
| H. sapiens |
ENSP00000409533 |