MidgeBase gene description page [Pn.03505]
Outline
| Gene ID | Pn.03505 |
| Type | Protein coding gene |
| Scaffold | PnScaf2912 |
| Start | 669 |
| End | 3175 |
| Direction | + |
Sequence
Transcript: 1653 (bp)
ATGACGGGCGAGCCTGTTTATAATGGAACGACTACCACAAACACAGCCGTCGAGAACGGCGACAGAGCGGACAACAGACTCATCATGCTCGAGACGAAGGAGGAGAGAACAGACCGAATGTGGTCATTACGCATAATTTACTTCACAATGTTCCTGATAAGCTTGGGCTTCTCGATTGTGCTGTCGGGAGTGTGGCCTTATCTCGACAAGCTCGATCCACATGCCGGCAAGGAGTTCATGGGACTGGTGGTCGCGGCAAATCCCCTCGGCCAGATGCTCTTCAGCCCAATCTTCGGCTGGTGGTCGAACAGGATGCAATCAATTCGTCTTCCGCTGATCGCTTCGATGGTAATCTTCTGCATTTCGAGCGGCATCTACTCGACGCTGGATCTCTTCACTCACAATGTGAAATACTGGATGTTTGCCGCTCGCTTTTTCGTCGGCGTTTCCTCAGCAAACATCGCCATTTGTCGCTCGTATCTCTCGGCTGCCACGACCGTCAAGGAGCGCACAGACTCGGTGTCGATGATGAGCTTGGCTCAGGTTCTTGGGTTCGTCTTCGGTCCTGCACTCCAGGCTTCCGTAACTCCGCTCGGCGCCGACGGTTTCATCTTTCAGGGCTTAACCATCAACATGTACACGGCTGCTGGCTGGACGAATGTGTTGCTTGGCGCTATCAACCTCATCCTCTTCTTGCCCTATTTCTTCAAAGATCGACGAATTGCAGCAAAAGAGCAGATGATCATTCAAGGAAAGCAAACAGAGAAAGAAACGTGGAAGTCAGTTAAAGTTGACTACACAACCGCCTGGACATTGATCTTATCGTTCTTCGTAATTGTGTTCAATTTCGTGCTGCTCGAAACGATCGGAACTTCGCTGACGATGGATCAGTTTGCGTGGTCGAAGGGAGAGGCGCTCTATTATGTGGGAATTCTCATGTCGGTCGGTGCCTTCATAGCCTGCTTAGCATTCTGTCTCATTTCGCCGCTCACGAAGCGCTTCAAGGAGGCGGACCTTCTCATCTGGGGCGGCTTCTTCCTCATGGTCATCGGCCGGCTCGTCTTCATTCCCTACCGCGGCGAGCTGCCGAAATTGGCGGTCGACCGAGAGTACAAGATGGAGAACGGCAGCATAGCCTTCTACGACGAGGACGATCCTCTGGTGTTGGGCTGTCCGGTTAACTCGCAGCCCTGGTGTGCCAACACTCTGCAGCTGCAGTTCCCCGAGTTCCTGTTTGGCTTTGTCATCAGCACGATTGGCTATCCGATCGGCGTGACTTTGATTCAAACGATTTTCTCGAAGATTCTCGGGTCGCGACCTCAGGGCACTTGGATGGGACTGTTCACTGGTGCCGGCTGTGTGAGTCGAATCTTTGGACCGCTCGCTGTCGGCTCGCTCTACACGCGCTACGGAACGACTTGGACTTTCACGGTCACGTGCTTAATGATGTTCTTGCCGATGATCTGGCTTTATGTGTTGCGCGATCGTCTGTTAATCGAAGAAGTCGACGTCAAGTCCGTTGAAATGAAGAATCTCAACGGCAATGCGGAAAAGATTGCGAACGGCACGAATGGAGTTGTTAGACACAAAGCTGTGATCGTAAACGAAAACGAGACGACTGACGAGCAGGAGAGATTTATTTCGAATGGTCAC
Protein: 551 (aa)
MTGEPVYNGTTTTNTAVENGDRADNRLIMLETKEERTDRMWSLRIIYFTMFLISLGFSIVLSGVWPYLDKLDPHAGKEFMGLVVAANPLGQMLFSPIFGWWSNRMQSIRLPLIASMVIFCISSGIYSTLDLFTHNVKYWMFAARFFVGVSSANIAICRSYLSAATTVKERTDSVSMMSLAQVLGFVFGPALQASVTPLGADGFIFQGLTINMYTAAGWTNVLLGAINLILFLPYFFKDRRIAAKEQMIIQGKQTEKETWKSVKVDYTTAWTLILSFFVIVFNFVLLETIGTSLTMDQFAWSKGEALYYVGILMSVGAFIACLAFCLISPLTKRFKEADLLIWGGFFLMVIGRLVFIPYRGELPKLAVDREYKMENGSIAFYDEDDPLVLGCPVNSQPWCANTLQLQFPEFLFGFVISTIGYPIGVTLIQTIFSKILGSRPQGTWMGLFTGAGCVSRIFGPLAVGSLYTRYGTTWTFTVTCLMMFLPMIWLYVLRDRLLIEEVDVKSVEMKNLNGNAEKIANGTNGVVRHKAVIVNENETTDEQERFISNGH
| Type | Start | End | Length |
| CDS |
669 |
878 |
210 |
| CDS |
1088 |
1513 |
426 |
| CDS |
1633 |
1723 |
91 |
| CDS |
1905 |
2036 |
132 |
| CDS |
2124 |
2595 |
472 |
| CDS |
2851 |
3172 |
322 |
| intron |
879 |
1087 |
209 |
| intron |
1514 |
1632 |
119 |
| intron |
1724 |
1904 |
181 |
| intron |
2037 |
2123 |
87 |
| intron |
2596 |
2850 |
255 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001956264 |
GF25123 [Drosophila ananassae] gb|EDV39070.1| GF25123 [Drosophila ananassae] |
1e-165 |
| InterPro |
IPR020846 |
Major facilitator superfamily domain |
|
| InterPro |
IPR011701 |
Major facilitator superfamily |
|
| InterPro |
IPR016196 |
Major facilitator superfamily domain, general substrate transporter |
|
| Gene Ontology(BP) |
GO:0055085 |
transmembrane transport |
|
| Gene Ontology(CC) |
GO:0016021 |
integral to membrane |
|
| Pfam |
PF07690.11 |
Major Facilitator Superfamily |
5.9e-41 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| T. castaneum |
TC010995 |
| S. invicta |
SI2.2.0_14075 |
| A. mellifera |
GB13898-PA |
| D. melanogaster |
FBgn0035767 |
| D. plexippus |
DPOGS203228PA |
| B. mori |
BGIBMGA009191-TA |
| C. quinquefasciatus |
CPIJ017477 |
| H. melpomene |
HMEL003245-PA |
| P. vanderplanki |
Pv.01616 |
| P. vanderplanki |
Pv.06465 |
| N. vitripennis |
NV18806-PA |
| A. gambiae |
AGAP012381 |
| P. humanus |
PHUM613120-PA |
| A. aegypti |
AAEL009195 |
| H. sapiens |
ENSP00000425000 |
| M. musculus |
ENSMUSG00000025759 |
| H. sapiens |
ENSP00000296468 |