MidgeBase gene description page [Pn.03473]
Outline
| Gene ID | Pn.03473 |
| Type | Protein coding gene |
| Scaffold | PnScaf2880 |
| Start | 39561 |
| End | 41218 |
| Direction | + |
Sequence
Transcript: 1197 (bp)
ATGACGGGAAGCTTGCTCTTGATAATTTTGTTGGCATTTTCAATCTCGAAGGTTGCGAGAGGACAATCGGGATTATTGACGGGTAGACAAGATAATGTGATTAACCTTCTATCACTCGCAGGATTTGCAAATGAACTTCATCAAGTGGAGACAGAGGACGGTTATGTTCTTAAGCTTCACCGAGCCTTTCCCAAACAGCCGCGAGATAGACGCGGTCCTGTGCTGCTTGTGCACGGGTTTCTAGGAACGGCAGCTGACTTCGTTCTCACCGGACCGAGCATCTCGCTGGCATATCAGCTCCTCAACGATGGCTATCACGTTTTCCTCGCCAACTGCCGCGGATCGAAATTCTCGATGAGGCACAAAGCCTTTGATCCGCTTACGCGCGAATTCTGGCGATTTAGCTTCGACGAAATTGGCTTATTGGACTTGCCGGCCATCATTAATTACGCGCTCTTTTTGACGGAGCAAAAGTCACTCTTTTATGTGGGTCACAATCAAGGAGCGACGGCGTTGCTCGCTCTTCTGTCGCTGCGGCCACGATTCAATGAGAAAATCATTCAAGCGCACTTTCTGGCTCCGATCGCATTCATGGACTTTCCGCACCCGATTTTGGCGTTCAATGCGAAAAGCTACGAGGAGTCGGCGCGAGCGCTCAAGTCTTACAGCTTCGCCTCGATGGTCGAGTTCACAAAGACAGTCGTCGACAACTTCTGCAGCGAGACGATTCCGGGCGGTGTCCGCTTCTGTGTCCGGCTGTGGGAATTTATTTTCGGTCGCAATCAAGCGGAAACCGAAATCGATCCGAAAGTTCTGCTCGACGTTCCCTCGTTTATCTCGCCAGCTGCAAGCGTCCGACAGCTCCTGCATTTTCTGCAACTTTATCGCTCCGGAAAGTTTCAGAGCTATGGGAGTCGAGATGGCACGCCGCCGAGGGAGTACAAGCTCACAAACGTGCAGACTCCCGTGTACATCTATCACGGCGCCGAGGACTTGATTGTTTCTCGAGTGGACGTCGAGAGATTGAGGAATGTCCTTGCGCCAGTCGTCAAATTGTATAAGGTTGTGCCGAATTGGAATCACTACGATATGCTGCTGAGCCGAAACGCCAAAGCTCGTCTCTATGACGACATTTGCCGAGCGATGACAAACGATGGACTCGATTTCTTCGGATACGTCAGGAACATCTTCACCGGC
Protein: 399 (aa)
MTGSLLLIILLAFSISKVARGQSGLLTGRQDNVINLLSLAGFANELHQVETEDGYVLKLHRAFPKQPRDRRGPVLLVHGFLGTAADFVLTGPSISLAYQLLNDGYHVFLANCRGSKFSMRHKAFDPLTREFWRFSFDEIGLLDLPAIINYALFLTEQKSLFYVGHNQGATALLALLSLRPRFNEKIIQAHFLAPIAFMDFPHPILAFNAKSYEESARALKSYSFASMVEFTKTVVDNFCSETIPGGVRFCVRLWEFIFGRNQAETEIDPKVLLDVPSFISPAASVRQLLHFLQLYRSGKFQSYGSRDGTPPREYKLTNVQTPVYIYHGAEDLIVSRVDVERLRNVLAPVVKLYKVVPNWNHYDMLLSRNAKARLYDDICRAMTNDGLDFFGYVRNIFTG
| Type | Start | End | Length |
| CDS |
39561 |
39659 |
99 |
| CDS |
39763 |
39837 |
75 |
| CDS |
40134 |
40970 |
837 |
| CDS |
41030 |
41215 |
186 |
| intron |
39660 |
39762 |
103 |
| intron |
39838 |
40133 |
296 |
| intron |
40971 |
41029 |
59 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001361999 |
GA10982 [Drosophila pseudoobscura pseudoobscura] gb|EAL26578.2| GA10982 [Drosophila pseudoobscura pseudoobscura] |
2e-53 |
| Pfam |
PF00561.15 |
alpha/beta hydrolase fold |
2.2e-07 |
| Pfam |
PF12695.2 |
Alpha/beta hydrolase family |
2e-11 |
| Pfam |
PF12146.3 |
Putative lysophospholipase |
0.035 |
| Pfam |
PF12697.2 |
Alpha/beta hydrolase family |
1e-13 |
| Pfam |
PF02129.13 |
X-Pro dipeptidyl-peptidase (S15 family) |
0.14 |
| Pfam |
PF04083.11 |
Partial alpha/beta-hydrolase lipase region |
3.4e-14 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| P. vanderplanki |
Pv.04791 |
| A. aegypti |
AAEL013152 |
| A. gambiae |
AGAP009009 |
| A. aegypti |
AAEL013157 |