MidgeBase gene description page [Pn.03451]
Outline
| Gene ID | Pn.03451 |
| Type | Protein coding gene |
| Scaffold | PnScaf2848 |
| Start | 4485 |
| End | 5864 |
| Direction | + |
Sequence
Transcript: 1206 (bp)
ATGGATGCTGACAACAAACTATACGATCTTTTAGGCGTCTCACGAAATGCAACCGATGCTGAAATTAAAAAGAGTTATCGTAAGCTTGCAATGAAATACCACCCGGACAAAAACCCAAATCCCGAGGAGGCGGAGAAGTTCAAGGAGATAACGTATGCCTACGAAATCCTCTCAGATGCAGACAAAAGAAAGACTTATGACCGCTATGGCGTGAAGGGCCTGCAGGAGGGAGGCGCCGACAACAGCGACATGTTTAGTCACATTTTCGGCTCATTTTTCGGCGGCGGTGGCGGCGGCGGCCGGTCGGGTCCTCAGCAGTGCGAGCCGATCGTCATGCAGGAGCTGGTAACGCTGGAGGATCTGTACGTGGGCGGGCGTGAGATTCCACGCAAAGTGACTCGAATCATCTGCTGCTCAAAGTGCAACGGCCAGGGAGGAAAGAACGTGAAGAAGTGCAAGGAGTGCCGAGGCACGGGCACGAAGATCATCATCCACCAAATGGGCTTCATGACCCAGCAAATCGCGACCAAATGCAACGACTGCGATGGCAGCGGCGAGTTCATAGACAAGAAGGACCGCTGCGACATGTGCAAGGGCTCGAAGACGGTCGAGGAGAAGAAGGAGATTACGATTCACATTGACAAAGGCATGAAGCACGCACAGAAGGTCATTTTCCGGGGCGAGGGCCACCACTTGCCCGACTCCGTCCAGGGCGACATCATCGTGGTGCTGAAGGAGCAGGGACACGAGACTTTCAAGCGCGAGAACAATGATCTAATTCTGAACGAGACAATTTCCATCACGCAGGCACTGTGTGGCTTCGACTTAGTGATAAAGCATCTGGACGGCCGCGACCTCCATGTGAAACATGAGGCCGGCAACGTCATGAAGAACGGCGACATCAAGTGCGTCGTCGGCGAGGGCATGCCCATCTACAAGAACCCCTTCGAGAAGGGCGTCCTCTTCATCAACTTCACGGTCGAGTTTCCCACGAGCATGGACGTGTCCGTGCTCGAGGCGCTCGAGAAGTGCTTGCCGCCGCGGCCGGCCTTCGTCATGCCCGTCGGCGAGCACGTGGAGGAGGTCAGCATGTCCGACTACGACCCGAGCTCTCGGTCGGGCCGGAAAAAACACTCGGCCGCATACCATTCCGATTCCGAGGACGAGGAGGGCGCCGGCGGTCCAGGTGTTCAGTGCAGAGCTTCA
Protein: 402 (aa)
MDADNKLYDLLGVSRNATDAEIKKSYRKLAMKYHPDKNPNPEEAEKFKEITYAYEILSDADKRKTYDRYGVKGLQEGGADNSDMFSHIFGSFFGGGGGGGRSGPQQCEPIVMQELVTLEDLYVGGREIPRKVTRIICCSKCNGQGGKNVKKCKECRGTGTKIIIHQMGFMTQQIATKCNDCDGSGEFIDKKDRCDMCKGSKTVEEKKEITIHIDKGMKHAQKVIFRGEGHHLPDSVQGDIIVVLKEQGHETFKRENNDLILNETISITQALCGFDLVIKHLDGRDLHVKHEAGNVMKNGDIKCVVGEGMPIYKNPFEKGVLFINFTVEFPTSMDVSVLEALEKCLPPRPAFVMPVGEHVEEVSMSDYDPSSRSGRKKHSAAYHSDSEDEEGAGGPGVQCRAS
| Type | Start | End | Length |
| CDS |
4485 |
4556 |
72 |
| CDS |
4728 |
5861 |
1134 |
| intron |
4557 |
4727 |
171 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_970724 |
PREDICTED: similar to DnaJ (Hsp40) homolog, subfamily A, member 2 [Tribolium castaneum] gb|EFA03800.1| hypothetical protein TcasGA2_TC013913 [Tribolium castaneum] |
1e-105 |
| InterPro |
IPR008971 |
HSP40/DnaJ peptide-binding |
|
| InterPro |
IPR002939 |
Chaperone DnaJ, C-terminal |
|
| InterPro |
IPR001623 |
Heat shock protein DnaJ, N-terminal |
|
| InterPro |
IPR003095 |
Heat shock protein DnaJ |
|
| InterPro |
IPR012724 |
Chaperone DnaJ |
|
| InterPro |
IPR018253 |
Heat shock protein DnaJ, conserved site |
|
| InterPro |
IPR001305 |
Heat shock protein DnaJ, cysteine-rich domain |
|
| Gene Ontology(BP) |
GO:0006457 |
protein folding |
|
| Gene Ontology(BP) |
GO:0009408 |
response to heat |
|
| Gene Ontology(MF) |
GO:0005524 |
ATP binding |
|
| Gene Ontology(MF) |
GO:0051082 |
unfolded protein binding |
|
| Gene Ontology(MF) |
GO:0031072 |
heat shock protein binding |
|
| Pfam |
PF01556.13 |
DnaJ C terminal domain |
1.8e-23 |
| Pfam |
PF00684.14 |
DnaJ central domain |
6.3e-14 |
| Pfam |
PF01155.14 |
Hydrogenase expression/synthesis hypA family |
0.63 |
| Pfam |
PF00226.26 |
DnaJ domain |
3.7e-27 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| B. mori |
BGIBMGA006196-TA |
| H. melpomene |
HMEL016409-PA |
| T. castaneum |
TC013913 |
| H. sapiens |
ENSP00000314030 |
| P. vanderplanki |
Pv.16739 |
| M. musculus |
ENSMUSG00000031701 |
| D. plexippus |
DPOGS214149PA |