MidgeBase gene description page [Pn.03434]
Outline
| Gene ID | Pn.03434 |
| Type | Protein coding gene |
| Scaffold | PnScaf2837 |
| Start | 69323 |
| End | 71743 |
| Direction | - |
Sequence
Transcript: 1851 (bp)
ATGCTGGCGACAATCGTGAATTTTATCTCGCTGCTCGTTTGCAGCAGCAGTAGCGGCAGCAGCGAGTTGATTGATGCCGCAATCAGCGTAATAACAGACATTTGTGCGAGCGACAAAGTGACGGCGAGCGTGATCTTCGAGGCGGCGTGTCGCGCCAACTTCACCTTCATGGACGACGTCAATAAAATTCTGCGCGAAAGCTCCAGCGGCCATCACATTTCCCTCCAGATCCAGACCGACCTACCGCACGATGCTTCGGATGTGCGCTGCAATATCGTCCTCACAAGCGCCTGCAGCAACTTCCTGCGAATTTACGAGGCGATGGCCGACAGCACCTTCTCCCACCACGACTCCCCGCTGCTGATTGTTCTCGACAGTCGCGAGCAAGTCGAAGAGATTTTCGCGATTCTGTGGCGCGCAAACATCCACAAAGTCAACGTCCTGCTCAGCGACCTCAGCAGTGTCGCCGTGCTGACGTTCTTTCCCTTCAAACATTTGAGCTGCGGCGACACGACGCCGACGCTCATCAACCGCTTCTCCAACGGCTCCTTCACGCACACGCCCTTTTTCCCCGAAAAGATGGACGACCTGCACGAGTGCCCCGTTCAAGTGTCGACCTCGAACAACTCGCAGCCCTTCATTTTCGCGGAGCGCCTGGCGAACGGCAGCTACGAGCTGCACGGCCGCGACATCAAACTCCTCGACACGCTCTCGCGCGCGCTCAACTTCACCGTCGCCTACGCGTACGTCGGCAGCGAGGGCTTCCTCCTCGAGAACGGCACGGCGCAGGGCGCGCTGAAGACGCTCGTCGACGGCCGCAGCGACCTCGCCATCGCCGATCTCTGGCTGAAGGCGAACCGGCTGAAGTTCATCGACGCGAGCCATGCCTACATCACGACGACTATCGCGTTCGTGATCCCGCCGGGCGCGGAGCTGACGTCGTTCGAGAAGTACGTGAAGCCGCTGGACGCGGTGACTTGGCTGTGCCTGCTGCTCACCATCGGCGTCGCTCACTTGACGATTTGCGTCGTGCAGAAAATGTCGCGCGAGGCGCAGGAGTTTGTGTTCGGGAGAGGCGTGCACGATCCGCACATGAACGTGCTGGTGGCGCTGGTCGGCGGATCGCAGCCGGTGCTGCCGCAGAAGAACTTTGCGCGCTACATCCTCACGCTGTTCCTGCTGTTCTGCCTCGTGGTGCGGACGCTCTATCAAGGCTCGCTGTATCGCTTTCAGCAGATGAAGATAAGCCACAAGGAGGTGCAATCGATAGACGAGATGATTGAGCGCGACTACAAGTTCTATGTCGTGCCGTCGATTCTCGATTTGATCGAAGGCCAGCCGAGAATTTATGAGAGACGAATCGTTATGACATTGGAGCAGCGCGCGCTCTTATACAACAAGTCGCAGGATCCGTCGTTTAAGGGCGTCTTTCCGCGCTCGCTGACGGGCGTTATGTACTCGAATCAGTTGAATTACAACACCTCGATCGACCTGATTTGCAAGGAGAAGTTTATGACGTTCTCGGTGGTTATTTATACGCGCAAGGGCTTCTACCTGCTCAGTGCACTCAACGAGAAAATCGCACAACTGCAGACGGGCGGCTTGATTGAATATTGGCACTCGCAGATTTTCGATCAGCGTTTCTTGCACGTGAGCGAGTCGCAGGAGCCGCAGCCGATCGAGATGAGGCATCTGGGCGGCTGCTTCGTGATTTGGCTGGCCGGCTGTGGGGTCGCCTTTTTTGCACTCTTCTGCGAGATTTCGTATGCAAAAGTCAGCAAGCGGCGGCAGCGGATTTATCGCAAAAGAAGCAGTAGCTCGCAGCTCAGCGATTACTCAAGTAATCGGCAA
Protein: 617 (aa)
MLATIVNFISLLVCSSSSGSSELIDAAISVITDICASDKVTASVIFEAACRANFTFMDDVNKILRESSSGHHISLQIQTDLPHDASDVRCNIVLTSACSNFLRIYEAMADSTFSHHDSPLLIVLDSREQVEEIFAILWRANIHKVNVLLSDLSSVAVLTFFPFKHLSCGDTTPTLINRFSNGSFTHTPFFPEKMDDLHECPVQVSTSNNSQPFIFAERLANGSYELHGRDIKLLDTLSRALNFTVAYAYVGSEGFLLENGTAQGALKTLVDGRSDLAIADLWLKANRLKFIDASHAYITTTIAFVIPPGAELTSFEKYVKPLDAVTWLCLLLTIGVAHLTICVVQKMSREAQEFVFGRGVHDPHMNVLVALVGGSQPVLPQKNFARYILTLFLLFCLVVRTLYQGSLYRFQQMKISHKEVQSIDEMIERDYKFYVVPSILDLIEGQPRIYERRIVMTLEQRALLYNKSQDPSFKGVFPRSLTGVMYSNQLNYNTSIDLICKEKFMTFSVVIYTRKGFYLLSALNEKIAQLQTGGLIEYWHSQIFDQRFLHVSESQEPQPIEMRHLGGCFVIWLAGCGVAFFALFCEISYAKVSKRRQRIYRKRSSSSQLSDYSSNRQ
| Type | Start | End | Length |
| CDS |
69326 |
69821 |
496 |
| CDS |
70389 |
71743 |
1355 |
| intron |
69822 |
70388 |
567 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001656710 |
hypothetical protein AaeL_AAEL003335 [Aedes aegypti] gb|EAT45392.1| conserved hypothetical protein [Aedes aegypti] |
5e-55 |
| InterPro |
IPR001638 |
Extracellular solute-binding protein, family 3 |
|
| InterPro |
IPR001320 |
Ionotropic glutamate receptor |
|
| Gene Ontology(BP) |
GO:0006810 |
transport |
|
| Gene Ontology(CC) |
GO:0016020 |
membrane |
|
| Gene Ontology(CC) |
GO:0030288 |
outer membrane-bounded periplasmic space |
|
| Gene Ontology(MF) |
GO:0005234 |
extracellular-glutamate-gated ion channel activity |
|
| Gene Ontology(MF) |
GO:0004970 |
ionotropic glutamate receptor activity |
|
| Gene Ontology(MF) |
GO:0005215 |
transporter activity |
|
| Pfam |
PF00060.21 |
Ligand-gated ion channel |
8.2e-10 |
| Pfam |
PF00497.15 |
Bacterial extracellular solute-binding proteins, family 3 |
6e-07 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| D. plexippus |
DPOGS214317PA |
| P. vanderplanki |
Pv.11059 |