MidgeBase gene description page [Pn.03364]
Outline
| Gene ID | Pn.03364 |
| Type | Protein coding gene |
| Scaffold | PnScaf2790 |
| Start | 7654 |
| End | 8122 |
| Direction | - |
Sequence
Transcript: 255 (bp)
ATGAAAGTTACAATTAAAAGCTGGACTGGCGTTGCTCTTTGGAAATGGATCGCAAATGATGAAAATTGCGGAATTTGTCGTATGGCCTTTGAAGCTTGCTGTCCTGATTGCTCGTTCGCTGGAGATGACTGCCCATTAGTTTGGGGCCACTGTTCTCACGTCTTTCACATGCACTGCATTTGCAAGTGGCTCAACTCACAACTCAATCAGCAACTGTGTCCAATGTGCAGACAAGCGTGGCGATTCAATGAACGA
Protein: 85 (aa)
MKVTIKSWTGVALWKWIANDENCGICRMAFEACCPDCSFAGDDCPLVWGHCSHVFHMHCICKWLNSQLNQQLCPMCRQAWRFNER
| Type | Start | End | Length |
| CDS |
7657 |
7892 |
236 |
| CDS |
8104 |
8122 |
19 |
| intron |
7893 |
8103 |
211 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001962586 |
GF14365 [Drosophila ananassae] gb|EDV31807.1| GF14365 [Drosophila ananassae] |
1e-34 |
| InterPro |
IPR024991 |
Anaphase-promoting complex subunit 11 |
|
| InterPro |
IPR001841 |
Zinc finger, RING-type |
|
| InterPro |
IPR013083 |
Zinc finger, RING/FYVE/PHD-type |
|
| Gene Ontology(CC) |
GO:0005680 |
anaphase-promoting complex |
|
| Gene Ontology(MF) |
GO:0005515 |
protein binding |
|
| Gene Ontology(MF) |
GO:0008270 |
zinc ion binding |
|
| Gene Ontology(MF) |
GO:0004842 |
ubiquitin-protein ligase activity |
|
| Pfam |
PF13923.1 |
Zinc finger, C3HC4 type (RING finger) |
0.00086 |
| Pfam |
PF12678.2 |
RING-H2 zinc finger |
9.6e-30 |
| Pfam |
PF11789.3 |
Zinc-finger of the MIZ type in Nse subunit |
6.6 |
| Pfam |
PF13639.1 |
Ring finger domain |
1.4e-07 |
| Pfam |
PF12861.2 |
Anaphase-promoting complex subunit 11 RING-H2 finger |
7.4e-39 |
| Pfam |
PF00097.20 |
Zinc finger, C3HC4 type (RING finger) |
8.1 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| H. sapiens |
ENSP00000459200 |
| P. vanderplanki |
Pv.06231 |
| H. sapiens |
ENSP00000460064 |
| C. quinquefasciatus |
CPIJ801763 |
| M. musculus |
ENSMUSG00000025135 |
| H. sapiens |
ENSP00000376181 |
| H. sapiens |
ENSP00000461648 |
| H. sapiens |
ENSP00000463567 |
| P. humanus |
PHUM531000-PA |
| H. sapiens |
ENSP00000458515 |
| A. mellifera |
GB17329-PA |
| H. sapiens |
ENSP00000463598 |
| D. melanogaster |
FBgn0250903 |
| N. vitripennis |
NV11382-PA |
| H. sapiens |
ENSP00000339695 |
| B. mori |
BGIBMGA005183-TA |
| H. sapiens |
ENSP00000464615 |
| H. sapiens |
ENSP00000460678 |
| H. sapiens |
ENSP00000463640 |
| H. sapiens |
ENSP00000458143 |
| A. gambiae |
AGAP008196 |
| H. melpomene |
HMEL006786-PA |
| T. castaneum |
TC007457 |
| D. plexippus |
DPOGS212597PA |
| A. aegypti |
AAEL007241 |
| D. plexippus |
DPOGS212596PA |
| H. sapiens |
ENSP00000458265 |