MidgeBase gene description page [Pn.03338]
Outline
| Gene ID | Pn.03338 |
| Type | Protein coding gene |
| Scaffold | PnScaf2775 |
| Start | 26717 |
| End | 27649 |
| Direction | + |
Sequence
Transcript: 531 (bp)
ATGAATCTTGAGAAGTTGAAAAAAATGCAACCCGAAGTCCGCATTGGTGGAAAAGGTATGCCGAGACGAAAGAAGAAGGTGGTCCACCAAAGCGCAGCGACAGATGACAAGAAGCTGCAATCGACTCTCAAGAAATTGGCTGTAAATAACATTCCAGGAATCGAGGAAGTAAATTTGTTGAAGAACGATGGATCTGTGATTCATTTCAACAACCCACGCACTCAAGCCTCTCTTCAATCAAACGTTTTTGCCATTACGGGACATGCCGAGACAAAGAACATTGCTGAAATGTTGCCTGGCATCCTCAACCACTTGGGTTCTGATGGACTAACACATTTAAAGCGAATTGCTTCGGCCCATCGGGCAAACATGCCCGCTACCACAGACGACGACATTCCAGATTTAGTTCAAAATTTCGAGAACGCAATGGGCTCGGGTGCTGGAGCCAGTACGAGTGGCGAGAACGAGGTGAACGTCGACGAGGCTGTCGAGTCGAAGAAGGATGAAGGCCTTGGCTGCGAAGCTGTTGAT
Protein: 177 (aa)
MNLEKLKKMQPEVRIGGKGMPRRKKKVVHQSAATDDKKLQSTLKKLAVNNIPGIEEVNLLKNDGSVIHFNNPRTQASLQSNVFAITGHAETKNIAEMLPGILNHLGSDGLTHLKRIASAHRANMPATTDDDIPDLVQNFENAMGSGAGASTSGENEVNVDEAVESKKDEGLGCEAVD
| Type | Start | End | Length |
| CDS |
26717 |
26771 |
55 |
| CDS |
26936 |
27159 |
224 |
| CDS |
27395 |
27646 |
252 |
| intron |
26772 |
26935 |
164 |
| intron |
27160 |
27394 |
235 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
EFZ09605 |
hypothetical protein SINV_01877 [Solenopsis invicta] |
4e-51 |
| InterPro |
IPR002715 |
Nascent polypeptide-associated complex NAC |
|
| Pfam |
PF01849.13 |
NAC domain |
6.5e-21 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| P. vanderplanki |
Pv.02698 |
| M. musculus |
ENSMUSG00000028568 |
| B. mori |
BGIBMGA010751-TA |
| H. melpomene |
HMEL016895-PA |
| S. invicta |
SI2.2.0_01877 |
| H. sapiens |
ENSP00000360664 |
| N. vitripennis |
NV10171-PA |
| A. aegypti |
AAEL014932 |
| C. quinquefasciatus |
CPIJ004906 |
| D. melanogaster |
FBgn0000181 |
| H. sapiens |
ENSP00000338516 |
| P. vanderplanki |
Pv.06337 |
| A. aegypti |
AAEL012271 |
| M. musculus |
ENSMUSG00000021660 |
| A. gambiae |
AGAP006614 |
| T. castaneum |
TC012217 |
| P. humanus |
PHUM204940-PA |