MidgeBase gene description page [Pn.03287]
Outline
| Gene ID | Pn.03287 |
| Type | Protein coding gene |
| Scaffold | PnScaf2719 |
| Start | 64739 |
| End | 67483 |
| Direction | - |
Sequence
Transcript: 2025 (bp)
ATGACGAAGAACGACGAGCAGGAGGACGCAGCACGATTTCAGGCGTGGAAGGCTTGCCTCGGAATTCTCGGCATTCCGTTTTTAGACGTAGTTCGAGTTCTCGCGGCGGTTCTGCTCCTGGGAAACATAAAGTTCATCGACAACGAGCGCTCTGAGGTCGAGGTGAATGGAGATGCTGAATTAAATTCGGTCGCAAGTCTCCTTGGCGTTTCTCCGCAGTCATTATTTAGGGGATTAACGACGAGAACGCACAACACAAACTCCCATGCGCGCGGCGGTCAACTGATTAAGTCTGTGTGCGACGCCAACATGTCTTATGTCGCGCGAGATTCGCTGGCAAAAGCGCTCTACTGCCGCACCGTCGCGACCATCGTGCGTCGAGCCAACAGTCTCAAGAGACTCGGCTCGGGTACGCTGAGCTCCGACTCGAACGAGTCCGTCCACAATCAGGTGGAGATCAATAGTCAGCATGCGTCGACGGTTGGCGGCAATTCGGCGAAATCGATGAATCAGATGGCCGTCCTGAACAACGTCGTGCGACATGCGACCGACGGCTTTATCGGCATCCTCGACATGTACGGCTTCGAGGAGCCGAAGTTTGCTCAGCTCGAGCACCTTTGCATCAACCTATGCGCGGAGACGATGCAGCACTTCTACAATACTCACATCTTCAAGAGCTCGATCGAGTCGTGTCGCGACGAGGGCATCATTTGCGAGAGCGAGATCGACTATGTCGACAACGTTCCGTGCATCGATCTCGTGTCGTCGCTGCGAACGGGCCTGCTGAGTCTTCTCGATGCCGAGTGCTCGATGCGCGGCACCGCCGAGAGCTATGTAGCGAAGATCAAGGTTCAACACCGCTCGTCGCCGCGCCTCCAGCAGAGCCCGATCGAGCAGTTCGACTCTCGCATGTTCACGATCCACCACTTCTCGGGCCACGTGGTCTACGATGCGAGCAACTTCCTCGACACAAACCGCGACATCATCAGCGACGACCTGGTGTCGGTGTTCTACAAACACAGCTGTCAGTTCGGCTTTGCGACTCACCTGTTTGGCGCGGAGTTGCGCGCTCTTTACTCACACGAGAACGTACCGCGCGGGACGTGGTTCCGCATCGCACCCACCTCGCACACTGACCTCCTCAACGATGGCGAGCGCCTCGAGCCGGTGTCCACGCTCACGCAGGACTTCCATACGCGCCTCGACAACCTGCTGAGGACGCTGGTTATGAGCAGACCGCACTTTGTGCGCTGCATCAAGAGCAACTCGAAGGAGGTGCCGAGCTACTTCGAGCGCAACACGGTCGTACGGCAAATTCGCGCGCTGCAAATTCTTGAGACGCTGAATCTAATGTCGAGCGGCTTTCCGCATCGCATGCGCTTCAAGCAGTTCATCAGTCGCTACAAGATGCTCGTGCCGTCGCGACTGATGAGACGGTGCGAGGACAACGTCATGGAGGATTGCAAATTGCTTCTAAACTGTGCCATTGAGCAGCCATTCGAGCCGAGCGCCTCTGTCATCCTGTCGTGGGCGCCCGGCAAGCGGCACATCTTCTTGAGCGAGGGCATGCGCCAGCACTTGGAGGGACTCCGCAACCACATCCGAAACCGCAGCGCTACCCTCATACAGTCGGTGTGGCGCGGCTGGCAGCTCCGGAAACTTAACACGATGAAGAGAATCAAAAAAGACTTGCTGCTGTCGTCGAACAACATGATTTCCAGCTCGATGATGTCTCGAGGACACATCACCACGACAATTAGACCTCGCCCACAACCGATAACTGGAACTCCCGATTTAGAATCGCCCCCGATGGTGCCACCGCCACGCTCCTACACCGTTTCGGGAAACTCCAAGCTCAAGTATCCGCAGATTCGGATCATGAAGATGAACTTCCCGGAAAACATGCAGATGAATAATGGAGAGCAGCTGAAGAAGGGAGAGGTCGTGACCGTGAAAGGAGCGTCTCAGCGCCGCGGTCATTTGCTGGTCGAGAGCAACGGTAGAGATTTATCGATGTTTACACGA
Protein: 675 (aa)
MTKNDEQEDAARFQAWKACLGILGIPFLDVVRVLAAVLLLGNIKFIDNERSEVEVNGDAELNSVASLLGVSPQSLFRGLTTRTHNTNSHARGGQLIKSVCDANMSYVARDSLAKALYCRTVATIVRRANSLKRLGSGTLSSDSNESVHNQVEINSQHASTVGGNSAKSMNQMAVLNNVVRHATDGFIGILDMYGFEEPKFAQLEHLCINLCAETMQHFYNTHIFKSSIESCRDEGIICESEIDYVDNVPCIDLVSSLRTGLLSLLDAECSMRGTAESYVAKIKVQHRSSPRLQQSPIEQFDSRMFTIHHFSGHVVYDASNFLDTNRDIISDDLVSVFYKHSCQFGFATHLFGAELRALYSHENVPRGTWFRIAPTSHTDLLNDGERLEPVSTLTQDFHTRLDNLLRTLVMSRPHFVRCIKSNSKEVPSYFERNTVVRQIRALQILETLNLMSSGFPHRMRFKQFISRYKMLVPSRLMRRCEDNVMEDCKLLLNCAIEQPFEPSASVILSWAPGKRHIFLSEGMRQHLEGLRNHIRNRSATLIQSVWRGWQLRKLNTMKRIKKDLLLSSNNMISSSMMSRGHITTTIRPRPQPITGTPDLESPPMVPPPRSYTVSGNSKLKYPQIRIMKMNFPENMQMNNGEQLKKGEVVTVKGASQRRGHLLVESNGRDLSMFTR
| Type | Start | End | Length |
| CDS |
64742 |
64966 |
225 |
| CDS |
65035 |
65102 |
68 |
| CDS |
65345 |
66678 |
1334 |
| CDS |
66827 |
66994 |
168 |
| CDS |
67061 |
67143 |
83 |
| CDS |
67202 |
67336 |
135 |
| CDS |
67472 |
67483 |
12 |
| intron |
64967 |
65034 |
68 |
| intron |
65103 |
65344 |
242 |
| intron |
66679 |
66826 |
148 |
| intron |
66995 |
67060 |
66 |
| intron |
67144 |
67201 |
58 |
| intron |
67337 |
67471 |
135 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001662586 |
myosin x [Aedes aegypti] gb|EAT35379.1| myosin x [Aedes aegypti] |
0.0 |
| InterPro |
IPR001609 |
Myosin head, motor domain |
|
| InterPro |
IPR000048 |
IQ motif, EF-hand binding site |
|
| Gene Ontology(CC) |
GO:0016459 |
myosin complex |
|
| Gene Ontology(MF) |
GO:0005515 |
protein binding |
|
| Gene Ontology(MF) |
GO:0005524 |
ATP binding |
|
| Gene Ontology(MF) |
GO:0003774 |
motor activity |
|
| Pfam |
PF00612.22 |
IQ calmodulin-binding motif |
1.2e-05 |
| Pfam |
PF00063.16 |
Myosin head (motor domain) |
4.3e-84 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| A. mellifera |
GB18164-PA |
| D. plexippus |
DPOGS212363PA |
| B. mori |
BGIBMGA004656-TA |
| A. aegypti |
AAEL012449 |
| S. invicta |
SI2.2.0_02418 |
| D. melanogaster |
FBgn0262029 |
| H. melpomene |
HMEL005306-PA |
| N. vitripennis |
NV10108-PA |
| A. mellifera |
GB18229-PA |
| T. castaneum |
TC010547 |
| P. vanderplanki |
Pv.02154 |
| C. quinquefasciatus |
CPIJ017570 |
| P. humanus |
PHUM205430-PA |
| A. gambiae |
AGAP009933 |