MidgeBase gene description page [Pn.03270]
Outline
| Gene ID | Pn.03270 |
| Type | Protein coding gene |
| Scaffold | PnScaf2717 |
| Start | 38999 |
| End | 53269 |
| Direction | - |
Sequence
Transcript: 1260 (bp)
ATGAATTTGGAAAAGTTTTACATCGTTTTCGTGATAGTTGTGACGAGCAGATTTTTAATAAGTTGTAACGCGGCCGGATCGTGTTTTGAGACGATCAATTCCGATGGAAAGTGCAGCGGACTTCTCGGAAACGACATCACAAAGGAGGAGTGCTGCACAAGCTTCGGCGTCGCTTATGCCGAAGCGATGAGCCACGAGGCGATCTTCTGGCTGCAAGCCGAGATGCGAAGGGAAAATTGCAAGCCGTGCAAAGAAATTACAGAGTCTTGTGACAACTTGAAATGCGGCACTGGTAAGCGATGCATAATGAAAAGAGGCCAACCAAAATGCATTTGCTCGCCACAATGTAAAGCGGCGACCGCAACGATTAATAAAAATCGCAAAGTAGGCGTCAACGAGGAATTCGCGGCGATGCCAGAAATGCCTGAAATGAGAAACGTAAATCGTCATTACACGGTCGTGAGACCTCCAATTATATCGGAAATGCAAAACGATGAGCCGAAGCTCGACAAGAGCCTCGCGAGGAGTCCGCGAAAATTGAACCAAAGCTCCGAGACTCCGACCGACGCCGACGGCGATGACGGCGACAAAATTTTCGAAATGAAGGTGCGCAGCAATCTGCTGTCGCGCAACAATCACAACAACCTCCAGCTCCTCGATGAATTCTATCTCGGAAACATTCCGAAGTTCGCTCAATATAGTCCCGTATGCGGTACCGATGGAAAGACATACAAGAACGAATGTCAGTTACAAAAGCGTGCATGCCGACAAGAAAATAAAAGGCTGGAAGTTCAAAATAAAGGTTTTTGTCAAAGCTCCTGCAAGTTCATCAAATGTCTCAACGGCAAGCAGTGCGTCGAGGACCAGAACTTGGAACCGCAGTGCGTAAGCTGCAGCAAGTGCGCACGGAAGAACCGAACCATCACGCATTTGGATCTGAAGAGGTTTGTGTGCGGTGTCGATGGCATCACTTATCGGACTGCCTGCGAACTGCAGCAAAAGTCCTGTCGCATCGGAAAGTTGATCCAACAAGCGCATCGTGGGCCGTGCAAAGAATCGCTAAGTTGTAATCAGTGTAAGAGGACAGAGCGATGCTTACCGGATCTTATTACGAATAAGCCAGTTTGTGTGTCTTGCAAGCGTCCCAATGGGAGATGCAGTGTCGAGTTAAAACGCGAAGAAAGTATGCGGCAACAACAACATAACATATCGCTCGAAATGCCACTTAATGAGAGACTCGTGCAACACGGGATTCGCTAT
Protein: 420 (aa)
MNLEKFYIVFVIVVTSRFLISCNAAGSCFETINSDGKCSGLLGNDITKEECCTSFGVAYAEAMSHEAIFWLQAEMRRENCKPCKEITESCDNLKCGTGKRCIMKRGQPKCICSPQCKAATATINKNRKVGVNEEFAAMPEMPEMRNVNRHYTVVRPPIISEMQNDEPKLDKSLARSPRKLNQSSETPTDADGDDGDKIFEMKVRSNLLSRNNHNNLQLLDEFYLGNIPKFAQYSPVCGTDGKTYKNECQLQKRACRQENKRLEVQNKGFCQSSCKFIKCLNGKQCVEDQNLEPQCVSCSKCARKNRTITHLDLKRFVCGVDGITYRTACELQQKSCRIGKLIQQAHRGPCKESLSCNQCKRTERCLPDLITNKPVCVSCKRPNGRCSVELKREESMRQQQHNISLEMPLNERLVQHGIRY
| Type | Start | End | Length |
| CDS |
39002 |
39090 |
89 |
| CDS |
41340 |
41343 |
4 |
| CDS |
41533 |
41645 |
113 |
| CDS |
46521 |
46760 |
240 |
| CDS |
47981 |
48113 |
133 |
| CDS |
48394 |
48821 |
428 |
| CDS |
48918 |
49100 |
183 |
| CDS |
53200 |
53269 |
70 |
| intron |
39091 |
41339 |
2249 |
| intron |
41344 |
41532 |
189 |
| intron |
41646 |
46520 |
4875 |
| intron |
46761 |
47980 |
1220 |
| intron |
48114 |
48393 |
280 |
| intron |
48822 |
48917 |
96 |
| intron |
49101 |
53199 |
4099 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001655402 |
hypothetical protein AaeL_AAEL011506 [Aedes aegypti] gb|EAT36404.1| hypothetical protein AaeL_AAEL011506 [Aedes aegypti] |
6e-37 |
| InterPro |
IPR017878 |
TB domain |
|
| InterPro |
IPR002350 |
Proteinase inhibitor I1, Kazal |
|
| InterPro |
IPR003645 |
Follistatin-like, N-terminal |
|
| InterPro |
IPR011497 |
Kazal-type serine protease inhibitor domain |
|
| Gene Ontology(MF) |
GO:0005515 |
protein binding |
|
| Pfam |
PF07648.10 |
Kazal-type serine protease inhibitor domain |
2.5e-18 |
| Pfam |
PF00050.16 |
Kazal-type serine protease inhibitor domain |
3.8e-15 |
| Pfam |
PF09289.5 |
Follistatin/Osteonectin-like EGF domain |
0.026 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| B. mori |
BGIBMGA001937-TA |
| H. sapiens |
ENSP00000256759 |
| H. melpomene |
HMEL005513-PA |
| D. melanogaster |
FBgn0259878 |
| T. castaneum |
TC030465 |
| P. vanderplanki |
Pv.04864 |
| T. castaneum |
TC030582-GA |
| D. plexippus |
DPOGS207515PA |
| A. mellifera |
GB13244-PA |
| N. vitripennis |
NV11571-PA |
| A. aegypti |
AAEL011506 |
| H. sapiens |
ENSP00000423508 |
| M. musculus |
ENSMUSG00000021765 |
| C. quinquefasciatus |
CPIJ009520 |
| A. gambiae |
AGAP006282 |
| H. sapiens |
ENSP00000380151 |
| S. invicta |
SI2.2.0_14239 |
| H. sapiens |
ENSP00000426315 |
| P. humanus |
PHUM388310-PA |