MidgeBase gene description page [Pn.03241]
Outline
| Gene ID | Pn.03241 |
| Type | Protein coding gene |
| Scaffold | PnScaf2702 |
| Start | 1802 |
| End | 2671 |
| Direction | + |
Sequence
Transcript: 867 (bp)
ATGAAATTTATTGTTGTTAGTCTAATTGGAATCCCTGCGAGTGGCAAGAGCTCATTGGCGCAGAAAATTTTAAAGTTATCGGCTGACAACGCGCTCGATGCAAATGTGCTCACTTTCAGTTTTGACGAGTTGCTTGCTGTTAACTTTGAGAGTCCTTCTGACGGTGACTACAAAAAGGCTCGTGAAGTACTTTTCAATAAGATTGAATGCCTAATTGAGAAGCTTAGGAGCCGTGAACTACATGCCTGGATGTCACTAATTGGAAGTGAAGATTTTAAAATTTCATCGAATTCCGTAAGCATCAAAGGCAGTTACGGGCGGACTCTGCTTGTTCTCGATGACAACATGTACTTTCGAAGTATGAGACAGCGAGCGAGACAGGTTTCCAAGAAATGCAAATGCGAGTACTTTCAAATTTTCCTGAAATCGGCATTAAATGACGCGATAGAAAGAAACAAGCATCGGAAGTCAGCAGTCGATGTTTCTGTGATTGAAAAAATGTTTAATGACATGGAAATTCCAATCAATGCGCGAACAATCGAGGTTGAAATCGAAAATCTCGACGAAGGAGCTTTTCTGAATGACTTACTCGATCGGATTGCGAATCCCGAAATCCTTTCCCGGGAGCAGTGTCAGCAGCTGAGAGTGCCCCAAGACCAATCAATAATTCACGAGCTGGATCTTTTCACGAGAAAAGAAGTTGGAACTCGAATCAGGGAAACGACGAGGACTGAGAAATCAAACAAAGTCTCTCAACATCTTAACGAAAAAAGAAAACAATTCATGAGTGATGTTCGATGTGGAAAAATCAAAGTGTCCACTGTTGAACTCATGGGAGTTCAGTTTAAAAAATTTCTAGAAAATGAA
Protein: 289 (aa)
MKFIVVSLIGIPASGKSSLAQKILKLSADNALDANVLTFSFDELLAVNFESPSDGDYKKAREVLFNKIECLIEKLRSRELHAWMSLIGSEDFKISSNSVSIKGSYGRTLLVLDDNMYFRSMRQRARQVSKKCKCEYFQIFLKSALNDAIERNKHRKSAVDVSVIEKMFNDMEIPINARTIEVEIENLDEGAFLNDLLDRIANPEILSREQCQQLRVPQDQSIIHELDLFTRKEVGTRIRETTRTEKSNKVSQHLNEKRKQFMSDVRCGKIKVSTVELMGVQFKKFLENE
| Type | Start | End | Length |
| CDS |
1802 |
2668 |
867 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_002039437 |
GM22728 [Drosophila sechellia] gb|EDW56179.1| GM22728 [Drosophila sechellia] |
1e-22 |
| InterPro |
IPR013641 |
Chromatin associated protein KTI12 |
|
| Pfam |
PF13671.1 |
AAA domain |
4.5e-08 |
| Pfam |
PF08433.5 |
Chromatin associated protein KTI12 |
1.8e-11 |
| Pfam |
PF13207.1 |
AAA domain |
7.6e-05 |
| Pfam |
PF01926.18 |
50S ribosome-binding GTPase |
0.17 |
| Pfam |
PF04220.7 |
Der GTPase activator (YihI) |
0.11 |
| Pfam |
PF07931.7 |
Chloramphenicol phosphotransferase-like protein |
0.048 |
| Pfam |
PF06414.7 |
Zeta toxin |
0.03 |
| Pfam |
PF13238.1 |
AAA domain |
0.0048 |
| Pfam |
PF13173.1 |
AAA domain |
0.0084 |
| Pfam |
PF01583.15 |
Adenylylsulphate kinase |
0.038 |
| Pfam |
PF13401.1 |
AAA domain |
0.046 |
| Pfam |
PF13191.1 |
AAA ATPase domain |
0.083 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| P. humanus |
PHUM297960-PA |
| M. musculus |
ENSMUSG00000063179 |
| A. aegypti |
AAEL002489 |
| H. sapiens |
ENSP00000357882 |
| P. vanderplanki |
Pv.00529 |
| H. sapiens |
ENSP00000384764 |
| D. melanogaster |
FBgn0031041 |
| H. sapiens |
ENSP00000384653 |
| C. quinquefasciatus |
CPIJ010839 |