MidgeBase gene description page [Pn.03236]
Outline
| Gene ID | Pn.03236 |
| Type | Protein coding gene |
| Scaffold | PnScaf2698 |
| Start | 31143 |
| End | 32011 |
| Direction | + |
Sequence
Transcript: 561 (bp)
ATGGCGCTATTAAATGCTGCAAAATCGTTCTTTCGCAACCACCGGTTCATAGCGAACTGCACTACGTATGGAATACTCTATGTGGGTGCTGAGTTTAGCCAACAAACAGTGACGAAAAAATTTTTGACTTCTCCACCACAAGATATAGACAAACCAACATTAGGTCGCTATGCTGTCATGGGAACATTCATTTACTCCCCAATTTTGTACAATTGGTACAAATGGCTTGATGGCAAATTTCCTGGAGTCGCAAGGAAAACGATTCTCAAGAAGCTGATCCTCGACCAATTTCTTTTAACCCCACCCCTCTTAGTTATTTTCTACACGGGAATGTCATTGATGGAGCTGAAATTCGATGATCCGTTCGAAGAGTGCAGAAAGAAGTTTGTGGCAACATTTCAACGATCTTGCTTATTTTGGCTTCCTGCTCAAACAATTAACTTTATATTAGTTCCTCCGACTTGGAGAGTAGTTTATATGGGTTTCGCCAGCTTTTGCTGGGTCAATATTTTATGCTTCATCAAACGACAAAAATTGGATAACTTCGAAGAAAAGGCCCAG
Protein: 187 (aa)
MALLNAAKSFFRNHRFIANCTTYGILYVGAEFSQQTVTKKFLTSPPQDIDKPTLGRYAVMGTFIYSPILYNWYKWLDGKFPGVARKTILKKLILDQFLLTPPLLVIFYTGMSLMELKFDDPFEECRKKFVATFQRSCLFWLPAQTINFILVPPTWRVVYMGFASFCWVNILCFIKRQKLDNFEEKAQ
| Type | Start | End | Length |
| CDS |
31143 |
31226 |
84 |
| CDS |
31294 |
31335 |
42 |
| CDS |
31518 |
31606 |
89 |
| CDS |
31663 |
32008 |
346 |
| intron |
31227 |
31293 |
67 |
| intron |
31336 |
31517 |
182 |
| intron |
31607 |
31662 |
56 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001649804 |
hypothetical protein AaeL_AAEL000644 [Aedes aegypti] gb|EAT48315.1| conserved hypothetical protein [Aedes aegypti] |
1e-68 |
| InterPro |
IPR007248 |
Mpv17/PMP22 |
|
| Gene Ontology(CC) |
GO:0016021 |
integral to membrane |
|
| Pfam |
PF04117.7 |
Mpv17 / PMP22 family |
2.1e-17 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| D. plexippus |
DPOGS213574PA |
| A. aegypti |
AAEL000644 |
| S. invicta |
SI2.2.0_10924 |
| A. gambiae |
AGAP012390 |
| H. sapiens |
ENSP00000457071 |
| H. sapiens |
ENSP00000457012 |
| H. sapiens |
ENSP00000454340 |
| B. mori |
BGIBMGA011645-TA |
| H. sapiens |
ENSP00000455081 |
| H. sapiens |
ENSP00000379669 |
| P. vanderplanki |
Pv.08822 |
| C. quinquefasciatus |
CPIJ018556 |
| C. quinquefasciatus |
CPIJ005195 |
| H. sapiens |
ENSP00000287594 |
| D. melanogaster |
FBgn0040805 |