MidgeBase gene description page [Pn.03215]
Outline
| Gene ID | Pn.03215 |
| Type | Protein coding gene |
| Scaffold | PnScaf2695 |
| Start | 11748 |
| End | 12905 |
| Direction | + |
Sequence
Transcript: 804 (bp)
ATGAAGTCCCGTTTGATTTTTCTTGCTGTCTGCTTTGTGCTTGGCGTTGAAGCAGATAGAAGCAGCCGTTTTTCAATCGATCAGAGAATAGTCGGAGGATTTGAGACCACAATTGAATTGGTTCCGTATCAAGTTTCGTTGCTTTACTTCGGCTTTCATCGATGTGGTGGCAGCATTTTATCGTGCAAATATGTCCTCACAGCAGCTCACTATTTAAATTTAACAGCAAATTTAAAAAAATATCTAATAGTCCGAGCAGGTTCAACATCACTTTCTGGGGGCGGCACTGTTCACGATATAATTGAAATTCACATGCATCCACAATATGACCCAGACCTCCTTGATTACGATGCCTCCATACTGTCCCTTCGAAATTTGATACGCTACGACGCATCCCGTCAACCAATCAAACTTCCGTTTCTGAACGAAGTGATTCCTGTCGGAACAGTTGTGGTCACATCGGGATGGGGATCGACGCAAAACTTCAATGAATCCAATGTAAACCTTCGACAAGTTCAGCTAAAAGTAACAAGGCAGGCTCAGTGTAATGTTGCACACTTGAGAGACGGCGGGGTGACGACTCGAATGGTTTGTGCCACTGCCGAGGGAAAAGATAGCTGCGATGGAGACAGTGGTGGACCTCTGCAAAATGTGAGAACGAAAAAACTCATTGGAATTGTTTCCTTCGGAGCATCTGGTGGCTGCGCACAGCCCAATGTCCCAGGAGTGTACACCAGAGTGCCAGCAATTAGACGTTGGATAAGAAGCATTGAACTTTACGCTGAATATAATAATCACCAGGAA
Protein: 268 (aa)
MKSRLIFLAVCFVLGVEADRSSRFSIDQRIVGGFETTIELVPYQVSLLYFGFHRCGGSILSCKYVLTAAHYLNLTANLKKYLIVRAGSTSLSGGGTVHDIIEIHMHPQYDPDLLDYDASILSLRNLIRYDASRQPIKLPFLNEVIPVGTVVVTSGWGSTQNFNESNVNLRQVQLKVTRQAQCNVAHLRDGGVTTRMVCATAEGKDSCDGDSGGPLQNVRTKKLIGIVSFGASGGCAQPNVPGVYTRVPAIRRWIRSIELYAEYNNHQE
| Type | Start | End | Length |
| CDS |
11748 |
11958 |
211 |
| CDS |
12061 |
12437 |
377 |
| CDS |
12493 |
12532 |
40 |
| CDS |
12592 |
12687 |
96 |
| CDS |
12747 |
12793 |
47 |
| CDS |
12870 |
12902 |
33 |
| intron |
11959 |
12060 |
102 |
| intron |
12438 |
12492 |
55 |
| intron |
12533 |
12591 |
59 |
| intron |
12688 |
12746 |
59 |
| intron |
12794 |
12869 |
76 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_317171 |
AGAP008294-PA [Anopheles gambiae str. PEST] gb|EAA12261.3| AGAP008294-PA [Anopheles gambiae str. PEST] |
1e-52 |
| InterPro |
IPR009003 |
Peptidase cysteine/serine, trypsin-like |
|
| InterPro |
IPR001314 |
Peptidase S1A, chymotrypsin-type |
|
| InterPro |
IPR001254 |
Peptidase S1/S6, chymotrypsin/Hap |
|
| InterPro |
IPR018114 |
Peptidase S1/S6, chymotrypsin/Hap, active site |
|
| Gene Ontology(BP) |
GO:0006508 |
proteolysis |
|
| Gene Ontology(MF) |
GO:0004252 |
serine-type endopeptidase activity |
|
| Gene Ontology(MF) |
GO:0003824 |
catalytic activity |
|
| Pfam |
PF00089.21 |
Trypsin |
5.3e-51 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| P. vanderplanki |
Pv.16795 |
| M. musculus |
ENSMUSG00000032091 |
| H. sapiens |
ENSP00000429889 |
| H. sapiens |
ENSP00000428814 |
| D. melanogaster |
FBgn0034518 |
| H. sapiens |
ENSP00000435184 |
| H. sapiens |
ENSP00000429209 |
| A. mellifera |
GB10222-PA |
| H. sapiens |
ENSP00000416037 |
| H. sapiens |
ENSP00000430547 |