MidgeBase gene description page [Pn.03152]
Outline
| Gene ID | Pn.03152 |
| Type | Protein coding gene |
| Scaffold | PnScaf2667 |
| Start | 8162 |
| End | 8956 |
| Direction | + |
Sequence
Transcript: 792 (bp)
ATGGCAAATTCGATAGATTTAGAGAATAAGTTAGTGTATCTGCTGGTCACTGGTGCAAGCAAGGGAATAGGGAAGGAGTTGGCGATTGAGACTTCACGAAATTTGAAAGCCGGTTCGATTGTTGTTTTGCTGGCTCGAAGCATTGACAGACTCGAGACGACCAAGGCAGCAATCAACGAACTCAATAAGGACGTTAAAGTCATTGTCAAGTCGATCGACCTTGCGCGACCGTCGGTGACAGATTTGGACGACATAGTCAAAGGCTCCTTCGATGTGTCAGTTAAGTTTGATTTGGCGATGGCCATTCACAATGTCGGCACTCTTGGCGACATCAGCAAATGGTCCAAGGACATTGAGGAGTACGGCGAGCTTGAGTCTTACTTTGACACAAACGTCTTTGCCCCGGCAATTCTCAACAACCGCCTGCTAAAGGTCATTCCCGAAAGCATCAAAACATTCATTGTTAACATAACATCCAAAGCTGCCTTGCACGCCTTTAAGAGCTTCGGGTTCTACTGTATGGGCAAGGCTGCTCGCGAAATGTATTTCAAGGTTCTCGCTGAAGAGTTTAAAAATCTGCTGGTGCTTAACTATTCGCCGGGACCTGTTGAGTCGGACATGACGGTTCATGCACAAAGTGCATCTGTCTCTGAAGAAACGTCCGAAATTTTTAAAAATTTACGCGAGAAAGGAACAATTTTGACGGCCGCTATGACGACCAAACGGTTTTTAGAAATTGTCAAAAAGGGAAATTACAAGTCCGGTGATCACGTAGACTTTTACGATGATGAT
Protein: 264 (aa)
MANSIDLENKLVYLLVTGASKGIGKELAIETSRNLKAGSIVVLLARSIDRLETTKAAINELNKDVKVIVKSIDLARPSVTDLDDIVKGSFDVSVKFDLAMAIHNVGTLGDISKWSKDIEEYGELESYFDTNVFAPAILNNRLLKVIPESIKTFIVNITSKAALHAFKSFGFYCMGKAAREMYFKVLAEEFKNLLVLNYSPGPVESDMTVHAQSASVSEETSEIFKNLREKGTILTAAMTTKRFLEIVKKGNYKSGDHVDFYDDD
| Type | Start | End | Length |
| CDS |
8162 |
8953 |
792 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001654165 |
short-chain dehydrogenase [Aedes aegypti] gb|EAT47019.1| short-chain dehydrogenase [Aedes aegypti] |
2e-69 |
| InterPro |
IPR006393 |
Sepiapterin reductase |
|
| InterPro |
IPR016040 |
NAD(P)-binding domain |
|
| InterPro |
IPR002347 |
Glucose/ribitol dehydrogenase |
|
| InterPro |
IPR002198 |
Short-chain dehydrogenase/reductase SDR |
|
| Gene Ontology(BP) |
GO:0008152 |
metabolic process |
|
| Gene Ontology(BP) |
GO:0055114 |
oxidation-reduction process |
|
| Gene Ontology(BP) |
GO:0006729 |
tetrahydrobiopterin biosynthetic process |
|
| Gene Ontology(MF) |
GO:0000166 |
nucleotide binding |
|
| Gene Ontology(MF) |
GO:0004757 |
sepiapterin reductase activity |
|
| Gene Ontology(MF) |
GO:0016491 |
oxidoreductase activity |
|
| Pfam |
PF04582.7 |
Reovirus sigma C capsid protein |
0.05 |
| Pfam |
PF13561.1 |
Enoyl-(Acyl carrier protein) reductase |
0.093 |
| Pfam |
PF00106.20 |
short chain dehydrogenase |
5.6e-14 |
| Pfam |
PF08659.5 |
KR domain |
0.00042 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| D. melanogaster |
FBgn0014032 |
| P. vanderplanki |
Pv.03975 |
| H. melpomene |
HMEL013055-PB |
| N. vitripennis |
NV10057-PA |
| A. mellifera |
GB18536-PA |
| S. invicta |
SI2.2.0_06730 |
| H. sapiens |
ENSP00000234454 |
| C. quinquefasciatus |
CPIJ802102 |
| A. aegypti |
AAEL001845 |
| D. plexippus |
DPOGS201017PA |
| M. musculus |
ENSMUSG00000068303 |
| M. musculus |
ENSMUSG00000033735 |
| T. castaneum |
TC006384 |
| B. mori |
BGIBMGA009104-TA |
| P. humanus |
PHUM366100-PA |
| A. gambiae |
AGAP008000 |