MidgeBase gene description page [Pn.03136]
Outline
| Gene ID | Pn.03136 |
| Type | Protein coding gene |
| Scaffold | PnScaf2662 |
| Start | 24135 |
| End | 27886 |
| Direction | - |
Sequence
Transcript: 2079 (bp)
ATGACTCACTACACAACGACAACGTTGAGTAGCATAAACTTCAGTCTCTCATCGTACACGGCGTTTCTGACACAGGAAAACTCACTGCACAATGACACATTCAATAATGTCTCGACGACGCTCGAATCGCTCGGGAAACTGCCGCCCGACTCGCCCTACACATTCTCGCAGAAGATCTTCATTGCGATCCTATTCGTCATCCTATCGCTGCTCACCGTCATCGGCAACTTCATGGTGATGATTTCGTTTAAAATCGACAAGCAGCTGCAGACGATCTCAAACTACTTCCTATTCTCGCTGGCGATAGCGGACTTTGCCATCGGTCTCGTCTCGATGCCGCTGTTTGCGGTGCACATGATTGCGGGATATTGGCCATTCGGTTCCTTCATCTGCGACACGTGGCTGTCATTAGATTATTTAGCATCAAATGCTTCCGTGCTTAATCTTCTTATCATTTCGTTTGATCGTTACTTTTCCGTTACCCGACCGTTGACTTATCGTGCGAAGAGAACGAATCGCAAGGCCGCCATAATGATCTCTTTAGCGTGGCTAATAAGTCTCATATTGTGGCCTCCGTGGATCTACTCATGGCCGTACATCGAAGGAATGAGGACGGTTCCTGAATACGAATGCTACATTCAGTTCATCGAAACGAATCAATTGATTACATTCATCACAGCCATTGCAGCGTTCTATGTGCCGGTGACGGTGATGTGTTTTCTATACTTTCGAATATGGCGCGAGACGAAAAAGCGTCAGAAGGAGCTGCCTGGCTTGCAGGGAGGCGGCGGCGGTGGTGGCGGCGGTTACAGCCATCAGAGCGTTAAGAAAGATGCATCGAAGCGATCTAATTCTAGCGACGAGACTTCAACAATAAATCATCAAATTGGCGAATACATCGATCCAAACTTGTGGCATCCGCCTCCTCACATGGCGGGCGACAACGAAAGCAATAGTTATTATTCAGGTGCACATCCACACTCGATTCATGATTTGTCTAGACGCACAAGTAAAAACTGCAAATCGGACTCGATGCTCGAGAGCATCAAGAATTGGTGTGTGGCATGGTGGCATTCAGGACAAGAGGAGGACTCTTTTGAAGACTTTGGCGACTGGTGTGACTACGAGGGCGAGCAGTCGTATGGCGAGTACGGAACGCCGTGCAGTGCAGAAACGCCCGTTCAGAGCTCAGTATCGAGGTGCACCTCGCTAAACATAATCCGTGATCCGTACGCGCGTGGCAGTTACTGCCAATCGATGGTCAACGACTCGCCGTCGACTTTCGTGAAGAACCGACAGCAGCAGACGCTGGTTGCAACGCAGTCAAGCACCGTCGGCATGAAGTCGTCGACGTCCAATAATAATGCCGTTGACAGCAAGACGCCGTCGTCGAATCTAAAGCGATCGCTGTCGCAGGACTCCGTTTATACAATACTGATAAGACTGCCAATCGAGAATAGTGGAAATGATACGCGTGGTGCGGCGAGCAGTAGTAGTACTGAGAATGCCGACATCAAACTTCCCTCCATAAAAATGTACCCCGAAGACGCGAACCTGTCCAAGATAATGATGTCGAAGCCCGGAGGCAGCGGCGTCGGCGACGAGTTTGGCGGCACGCTGAAGAAGGGCGAGAAAGATCCCTTTGCACTCCACACACCACACACATCGTACGAATTTATCAATCGACTACCATTAAATGCTAAAATAATTCCCCGCAAAACGGTGCTCACTGCGCGCGAGAAGCAGCAACAAAAGGCGGCGCTCAACAAGAAGAAAAAGTCCCAGGAGAAGCGGCAAGAGTCGAAGGCGGCCAAGACGCTGTCGGCGATCCTGCTCTCGTTCATTGTCACATGGCTCCCTTACAACATCCTCGTGCTCCTCAAGCCGCTCACGACATGCACAAAATGCATACCTCAAGAGATATGGGACGTCTTCTATGCCCTTTGTTATCTGAACTCAACAATAAACCCAATTTTATATGCACTTTGTAACGCTTCGTTTCGTCGAACGTACGTTCGTATTCTTACGTGTAAGTGGCAATCGAGAAATCGCGAGGGAATTTCACGCGGAGTTTATAAT
Protein: 693 (aa)
MTHYTTTTLSSINFSLSSYTAFLTQENSLHNDTFNNVSTTLESLGKLPPDSPYTFSQKIFIAILFVILSLLTVIGNFMVMISFKIDKQLQTISNYFLFSLAIADFAIGLVSMPLFAVHMIAGYWPFGSFICDTWLSLDYLASNASVLNLLIISFDRYFSVTRPLTYRAKRTNRKAAIMISLAWLISLILWPPWIYSWPYIEGMRTVPEYECYIQFIETNQLITFITAIAAFYVPVTVMCFLYFRIWRETKKRQKELPGLQGGGGGGGGGYSHQSVKKDASKRSNSSDETSTINHQIGEYIDPNLWHPPPHMAGDNESNSYYSGAHPHSIHDLSRRTSKNCKSDSMLESIKNWCVAWWHSGQEEDSFEDFGDWCDYEGEQSYGEYGTPCSAETPVQSSVSRCTSLNIIRDPYARGSYCQSMVNDSPSTFVKNRQQQTLVATQSSTVGMKSSTSNNNAVDSKTPSSNLKRSLSQDSVYTILIRLPIENSGNDTRGAASSSSTENADIKLPSIKMYPEDANLSKIMMSKPGGSGVGDEFGGTLKKGEKDPFALHTPHTSYEFINRLPLNAKIIPRKTVLTAREKQQQKAALNKKKKSQEKRQESKAAKTLSAILLSFIVTWLPYNILVLLKPLTTCTKCIPQEIWDVFYALCYLNSTINPILYALCNASFRRTYVRILTCKWQSRNREGISRGVYN
| Type | Start | End | Length |
| CDS |
24138 |
25017 |
880 |
| CDS |
25159 |
25346 |
188 |
| CDS |
25405 |
25558 |
154 |
| CDS |
25662 |
25815 |
154 |
| CDS |
25963 |
26061 |
99 |
| CDS |
26409 |
26778 |
370 |
| CDS |
27653 |
27886 |
234 |
| intron |
25018 |
25158 |
141 |
| intron |
25347 |
25404 |
58 |
| intron |
25559 |
25661 |
103 |
| intron |
25816 |
25962 |
147 |
| intron |
26062 |
26408 |
347 |
| intron |
26779 |
27652 |
874 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_314486 |
AGAP010513-PA [Anopheles gambiae str. PEST] gb|EAA09886.1| AGAP010513-PA [Anopheles gambiae str. PEST] |
0.0 |
| InterPro |
IPR017452 |
GPCR, rhodopsin-like superfamily |
|
| InterPro |
IPR000995 |
Muscarinic acetylcholine receptor |
|
| InterPro |
IPR000276 |
GPCR, rhodopsin-like, 7TM |
|
| Gene Ontology(BP) |
GO:0007186 |
G-protein coupled receptor signaling pathway |
|
| Gene Ontology(CC) |
GO:0016021 |
integral to membrane |
|
| Gene Ontology(MF) |
GO:0016907 |
G-protein coupled acetylcholine receptor activity |
|
| Pfam |
PF10320.4 |
Serpentine type 7TM GPCR chemoreceptor Srsx |
7.3e-10 |
| Pfam |
PF10328.4 |
Serpentine type 7TM GPCR chemoreceptor Srx |
0.0037 |
| Pfam |
PF06024.7 |
Nucleopolyhedrovirus protein of unknown function (DUF912) |
0.22 |
| Pfam |
PF02699.10 |
Preprotein translocase subunit |
2.4 |
| Pfam |
PF00001.16 |
7 transmembrane receptor (rhodopsin family) |
5.3e-81 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| A. mellifera |
GB12077-PA |
| C. quinquefasciatus |
CPIJ008330 |
| D. melanogaster |
FBgn0000037 |
| P. vanderplanki |
Pv.00662 |
| N. vitripennis |
NV12746-PA |
| A. aegypti |
AAEL017181 |
| B. mori |
BGIBMGA010995-TA |
| H. sapiens |
ENSP00000372750 |
| A. gambiae |
AGAP010513 |
| T. castaneum |
TC004470 |
| H. sapiens |
ENSP00000453745 |
| S. invicta |
SI2.2.0_08952 |
| M. musculus |
ENSMUSG00000074939 |
| H. melpomene |
HMEL010054-PA |
| D. plexippus |
DPOGS214534PA |
| M. musculus |
ENSMUSG00000046159 |
| P. humanus |
PHUM486980-PA |
| H. sapiens |
ENSP00000255380 |