MidgeBase gene description page [Pn.03083]
Outline
| Gene ID | Pn.03083 |
| Type | Protein coding gene |
| Scaffold | PnScaf2629 |
| Start | 8934 |
| End | 9765 |
| Direction | + |
Sequence
Transcript: 624 (bp)
ATGGCCTATGCTCTTCCGATTGTTATGCCGATGGTGGCGATGCCAATGATGGCGAGACCGAAGAACATCTTGATAGGATGCACGGGATCGGTAGCGACAATAAAGTTGCCAAACATCATTCACGAACTCAAGACAAAAGATCCGACGGTTAACATTAAAGTTATTTTGACGAGCAAAGCGCAGCAATTTATCTCGAGAGACTGCATCCCGGTCGAGGTCTATCAGGACGAGCATGAGTGGCAGATGTGGAAGCAACGAGGAGACCCAGTTCTTCACATCGACTTGGCAAAGTGGGCGGACGTGCTGCTCATTGCGCCGCTGGACGCGAACACGCTAGGGAAACTGAGCTCAGGCATGTGCGACAATCTTTTGACCTGTGTTGCACGCGCCTGGGATCTTGAAAAGCCTCTTCTCTTCTCGCCAGCGATGAATACAAAGATGTTCCAGCACCCAATCACTAGAAAGCAGATAGCCGATCTGAGAGGTTTTGGATACATTGAAATTAAAGCCATTTCCAAGACTCTCATGTGCGGCGATGTCGGCATAGGCGGAATGGCTGAGGTTAAGACAATCGCAGACATGACTTACAGCCATATGAACAATATCAAAAGTGAGCAACGTCAA
Protein: 208 (aa)
MAYALPIVMPMVAMPMMARPKNILIGCTGSVATIKLPNIIHELKTKDPTVNIKVILTSKAQQFISRDCIPVEVYQDEHEWQMWKQRGDPVLHIDLAKWADVLLIAPLDANTLGKLSSGMCDNLLTCVARAWDLEKPLLFSPAMNTKMFQHPITRKQIADLRGFGYIEIKAISKTLMCGDVGIGGMAEVKTIADMTYSHMNNIKSEQRQ
| Type | Start | End | Length |
| CDS |
8934 |
9009 |
76 |
| CDS |
9077 |
9153 |
77 |
| CDS |
9221 |
9292 |
72 |
| CDS |
9364 |
9762 |
399 |
| intron |
9010 |
9076 |
67 |
| intron |
9154 |
9220 |
67 |
| intron |
9293 |
9363 |
71 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_003397974 |
PREDICTED: phosphopantothenoylcysteine decarboxylase-like isoform 1 [Bombus terrestris] |
9e-59 |
| InterPro |
IPR003382 |
Flavoprotein |
|
| Gene Ontology(MF) |
GO:0003824 |
catalytic activity |
|
| Pfam |
PF02441.14 |
Flavoprotein |
4e-43 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| P. humanus |
PHUM000270-PA |
| N. vitripennis |
NV11853-PA |
| B. mori |
BGIBMGA009859-TA |
| T. castaneum |
TC010571 |
| A. aegypti |
AAEL010351 |
| P. vanderplanki |
Pv.08436 |
| D. plexippus |
DPOGS200870PA |
| A. gambiae |
AGAP011994 |
| H. sapiens |
ENSP00000456353 |
| M. musculus |
ENSMUSG00000063849 |
| H. melpomene |
HMEL011470-PA |
| S. invicta |
SI2.2.0_02925 |
| A. aegypti |
AAEL010356 |
| A. mellifera |
GB19920-PA |
| C. quinquefasciatus |
CPIJ019818 |
| H. sapiens |
ENSP00000343190 |
| D. melanogaster |
FBgn0050290 |