MidgeBase gene description page [Pn.03024]
Outline
| Gene ID | Pn.03024 |
| Type | Protein coding gene |
| Scaffold | PnScaf2587 |
| Start | 30205 |
| End | 31300 |
| Direction | + |
Sequence
Transcript: 717 (bp)
ATGCTTTCTCGCGCGGCTTTGTTGTCCACAGCCCAAAAGACGTCAGTCATGGCGCTCGCAGCCAGAGGTTCATCCTCGTCAACTCCAGGCTTTGAACGACCAGTTCGTCTCGAACATCCGGGCAAAGTTCGCATGGGATTCATCCCCGATGAATGGTTCAGATTCTTCTACCCAAAAACAGGTGTCACTGGCCCATATGTCTTCCTGGCCGGTCTCTCCACCTATCTCTTCTCGAAGGAGATTTATGTCATGGAACACGAGTACTATACCGGTCTCTCCATCCTCGTTGCCGTTATCTACGCGACAAAGAAGTTTGGTCCAGGACTCGCTAAATCACTCGATAAGGAAATCGACTCCTACGAAGCGGAATGGAATCAAAACCGCGAGGACGAACTGAAAACCTTCACCGATGCCATTGAGGAGGAGAAGAAGGAGCAATGGAGAGCTGAGGGCCAAACTTTGCTGATGGACGCAAAGAAGGAGAATGTCGCACTCCAACTTGAAGCCGCGTATCGCGAGCGTGCAATGAACGTTTATAGGGAAGTCAAGAAACGCTTGGATTACCAAGTTGAGCGTCAAAATGTTGACCGTCGCATCTCACAGAAACACATGGCTCAATGGATCGTCAACAATGTCCTCAAGTCGATTACACCGGATCAGGAGACACAGACACTCAACAAATGCATTGCCGATTTGGGTGCACTAGCAGCTCGTAAG
Protein: 239 (aa)
MLSRAALLSTAQKTSVMALAARGSSSSTPGFERPVRLEHPGKVRMGFIPDEWFRFFYPKTGVTGPYVFLAGLSTYLFSKEIYVMEHEYYTGLSILVAVIYATKKFGPGLAKSLDKEIDSYEAEWNQNREDELKTFTDAIEEEKKEQWRAEGQTLLMDAKKENVALQLEAAYRERAMNVYREVKKRLDYQVERQNVDRRISQKHMAQWIVNNVLKSITPDQETQTLNKCIADLGALAARK
| Type | Start | End | Length |
| CDS |
30205 |
30235 |
31 |
| CDS |
30481 |
30604 |
124 |
| CDS |
30668 |
30866 |
199 |
| CDS |
30935 |
31297 |
363 |
| intron |
30236 |
30480 |
245 |
| intron |
30605 |
30667 |
63 |
| intron |
30867 |
30934 |
68 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001847481 |
ATP synthase B chain, mitochondrial [Culex quinquefasciatus] gb|EDS26265.1| ATP synthase B chain, mitochondrial [Culex quinquefasciatus] |
1e-101 |
| InterPro |
IPR008688 |
ATPase, F0 complex, subunit B, mitochondrial |
|
| InterPro |
IPR013837 |
ATPase, F0 complex subunit B, mitochondrial, metazoa |
|
| Gene Ontology(BP) |
GO:0015986 |
ATP synthesis coupled proton transport |
|
| Gene Ontology(CC) |
GO:0000276 |
mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) |
|
| Gene Ontology(MF) |
GO:0015078 |
hydrogen ion transmembrane transporter activity |
|
| Pfam |
PF05405.9 |
Mitochondrial ATP synthase B chain precursor (ATP-synt_B) |
1.5e-53 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| A. mellifera |
GB14321-PA |
| A. gambiae |
AGAP001138 |
| H. sapiens |
ENSP00000358737 |
| B. mori |
BGIBMGA008670-TA |
| P. humanus |
PHUM079790-PA |
| H. melpomene |
HMEL012205-PA |
| H. melpomene |
HMEL009270-PA |
| T. castaneum |
TC009556 |
| C. quinquefasciatus |
CPIJ006067 |
| N. vitripennis |
NV10918-PA |
| A. aegypti |
AAEL005610 |
| S. invicta |
SI2.2.0_12939 |
| P. vanderplanki |
Pv.08939 |
| H. sapiens |
ENSP00000420366 |
| D. melanogaster |
FBgn0019644 |
| D. plexippus |
DPOGS215193PA |