MidgeBase gene description page [Pn.02978]
Outline
| Gene ID | Pn.02978 |
| Type | Protein coding gene |
| Scaffold | PnScaf2550 |
| Start | 17190 |
| End | 19990 |
| Direction | - |
Sequence
Transcript: 603 (bp)
ATGGGAGTAAATGAGGCCGAAAACTTTTGTTTAAATTGTCGCAAAAATGAAACAGGTGCCTCAATTGATAAGCCAATGGCGACGCTGGTGTACATTCACGGCGAGTCGTACGAGTGGAATTCGGGCAATTTATACGACGGAACGGTGCTCGCTGCCCACAGCAACATCATCGTCGTTACAATAAATTTCCGCTTAGGCATTCTCGGATTTCTCAAGACCGGCACGAAGGCGTCGTCTCAGGGAAATTTCGGCTTAATGGATCTGGTCGCGGGTCTTCACTGGCTGCGCGAGAATTTGCCGGCTTTCAACGGCAATCCCAACATGGTGACGCTAATGGGCCATGGGCATGGAGCGGCGCTCGCCAACATCCTCATTGTCTCGCCCGTCGCAAGCGATTTGATACATCGAGCGATTCTGATAAGCGGCTGTGCTTTGTCACCCTGGGCCATTCAGCGCGATCCATTGTCGATCAAGAAGAAGGTCGCAACTGATACGGGTTGTCACGGAGATTTATTAGACGATGATATTGCGCCATGTCTACGCAAGAAGTCCATATCAGAGCTGCTGGCAATCAAACTCGATTCCCCGAGCCGCTGTGGAAGT
Protein: 201 (aa)
MGVNEAENFCLNCRKNETGASIDKPMATLVYIHGESYEWNSGNLYDGTVLAAHSNIIVVTINFRLGILGFLKTGTKASSQGNFGLMDLVAGLHWLRENLPAFNGNPNMVTLMGHGHGAALANILIVSPVASDLIHRAILISGCALSPWAIQRDPLSIKKKVATDTGCHGDLLDDDIAPCLRKKSISELLAIKLDSPSRCGS
| Type | Start | End | Length |
| CDS |
17193 |
17205 |
13 |
| CDS |
17465 |
17660 |
196 |
| CDS |
18770 |
18958 |
189 |
| CDS |
19236 |
19394 |
159 |
| CDS |
19945 |
19990 |
46 |
| intron |
17206 |
17464 |
259 |
| intron |
17661 |
18769 |
1109 |
| intron |
18959 |
19235 |
277 |
| intron |
19395 |
19944 |
550 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_002052493 |
GJ21312 [Drosophila virilis] gb|EDW64648.1| GJ21312 [Drosophila virilis] |
9e-74 |
| InterPro |
IPR002018 |
Carboxylesterase, type B |
|
| Pfam |
PF07859.8 |
alpha/beta hydrolase fold |
4.6e-06 |
| Pfam |
PF12697.2 |
Alpha/beta hydrolase family |
0.088 |
| Pfam |
PF00135.23 |
Carboxylesterase family |
1.3e-63 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| D. melanogaster |
FBgn0031866 |
| C. quinquefasciatus |
CPIJ010245 |
| P. vanderplanki |
Pv.05703 |
| N. vitripennis |
NV50031-PA |
| T. castaneum |
TC013094 |
| P. humanus |
PHUM163560-PA |
| H. melpomene |
HMEL006790-PA |
| T. castaneum |
TC013095 |
| S. invicta |
SI2.2.0_07428 |
| A. gambiae |
AGAP002090 |
| A. aegypti |
AAEL014303 |
| D. plexippus |
DPOGS214158PA |
| A. mellifera |
GB10066-PA |
| B. mori |
BGIBMGA006202-TA |