MidgeBase gene description page [Pn.02952]
Outline
| Gene ID | Pn.02952 |
| Type | Protein coding gene |
| Scaffold | PnScaf2534 |
| Start | 14453 |
| End | 16276 |
| Direction | + |
Sequence
Transcript: 1821 (bp)
ATGATTGCCAATGAATGTCACAAGTCACAGCAAAGGCAGCATCGGAAAGAAGTAGCGGATAATTGCGTGAAAACCGTAAACGACAAGACAGTTGTCATCGACGATACAATGCTATTGATTTTGCGCAAAAGGCGTCGCACACTCTACCATCAAACGTGTCTATTGAGCGTCATGGCAGCATTCACAATTGGATTAGCGATGGGCGTCTTTTTCCTGCCATTAATCAGATTAACATCGGCCAAGAGCTCAGCTCCGACAGCGACAGCGACGACGACACCTCTCGATGACAGCAATTTGTCACTGACGGCCGCTCAGCTGCACACAAAGATGCACAAATATAATTTCAACAATAAACTGCAGTACACTAATGTGAATAGCAATCAGATTGATAGCAGTTTGAAGCAGCAACAGCAACAACAGCGAGAGCCGAAGAAGAAGGCAAGTTACTCTTCCGTGTCGTTTATCTCGGAAGACGATAATGAATATCTCAAGAATATGCTCGCTGAAAATAATGCTGCAGCAACAGCAACAGCCTTTGAAATGCCTCAGCAACTCACGGATGATGCAGCAATAGACAACATAAATAATAATAATAATAATAATAATAATAGTAATAGCAGCAATAGCGGCGGTGCAACCGAAGATGAGCCGCAACGGCAACAAAGTCTCGAGAGCTCCTACGAGCGGGAAAACAATGAGACATTGCGACGCGTTATCGATGATGATATTTATTGGGGTCAAGAGATTGAGAATCGCATACCGAATGGCTTCGGCAAGCGCGACATAAACGATTGGCAGAACTATTTGCAAAGCAACGTAACGGAAATCATAAAGATCGAGCAAGGATGTGGTCGCATGCAGAATCGTTTGGTTACGTTCAGTGACGGCGTGAAGGCATGCGTCCGGTATCGTCAGAACACCGATCAGATTCAGGGCGAGCTGTTCAGCTTCTTTCTCGGTCATCTGTTGAACATTACGAATCTGGTGCCGAGCACCGCGGCCGTCATCGATTGGGACTCTCGATTGTGGCTGCAAGTGAAGCAACACATAACCGAATCGCAATGGAAAACATCGCGTCCCGTTGTGTTCACAAAATGGATACCCGATCTTGTGCCGTCCAACATACCGGAACAATTTCGTTCGCTCGAGCGACACATGAGCAAGAATGACATATGGAACATAACGATGAGCGACGACGAAGAGGGAGACGGCAATGATGGCAGCAACAACAAACGCACCTCACACATACTCATCGATCGACTAAAGACAAAGAAACATGACGGCGACAATGATGGCAGCAACAGGCACAAATTGTGGCGCAAGAAGAAAATTACGTTGAATGGCCGGCTGTACGGGAAGTTTGTGGAGCTCGCGCAATGGTCCGACCTCATCATCTTCGACTATCTCATAGCGAATCTCGACCGGGTCGTTAACAATCTCTACAACTACCAGTGGAATGCCGACATCATGGCCGCGCCGGCGCACAACCTCGCCCGCCAAAAGGACTCGCAGCTGCTCGTGTTTCTCGACAACGAGTCGGGGCTTTTGCACGGCTATCGGCTGCTCAAAAAGTACGAGGTCTACCACAGCCAGCTCCTCGACGACCTCTGCGTTTTCCGGAAGTCGACGATCGAGGCGCTTCGCTATCTGAGGGACAACAATGCCGGCGAGTTGCTGAACAAAATGTTCGAGCAGATTGCGACTTTGAAAGTGCGCGACGTGCTACCGCCATTGCCCGAGAAGTCGATAAAAATTCTTGCCGATCGCATCGATCGAATCCTCAAGCAAGTCCAAAAGTGCCAGGACATGTACTCGGACCGA
Protein: 607 (aa)
MIANECHKSQQRQHRKEVADNCVKTVNDKTVVIDDTMLLILRKRRRTLYHQTCLLSVMAAFTIGLAMGVFFLPLIRLTSAKSSAPTATATTTPLDDSNLSLTAAQLHTKMHKYNFNNKLQYTNVNSNQIDSSLKQQQQQQREPKKKASYSSVSFISEDDNEYLKNMLAENNAAATATAFEMPQQLTDDAAIDNINNNNNNNNNSNSSNSGGATEDEPQRQQSLESSYERENNETLRRVIDDDIYWGQEIENRIPNGFGKRDINDWQNYLQSNVTEIIKIEQGCGRMQNRLVTFSDGVKACVRYRQNTDQIQGELFSFFLGHLLNITNLVPSTAAVIDWDSRLWLQVKQHITESQWKTSRPVVFTKWIPDLVPSNIPEQFRSLERHMSKNDIWNITMSDDEEGDGNDGSNNKRTSHILIDRLKTKKHDGDNDGSNRHKLWRKKKITLNGRLYGKFVELAQWSDLIIFDYLIANLDRVVNNLYNYQWNADIMAAPAHNLARQKDSQLLVFLDNESGLLHGYRLLKKYEVYHSQLLDDLCVFRKSTIEALRYLRDNNAGELLNKMFEQIATLKVRDVLPPLPEKSIKILADRIDRILKQVQKCQDMYSDR
| Type | Start | End | Length |
| CDS |
14453 |
16273 |
1821 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001237917 |
AGAP008093-PA [Anopheles gambiae str. PEST] gb|EAU76350.2| AGAP008093-PA [Anopheles gambiae str. PEST] |
1e-133 |
| InterPro |
IPR009581 |
Domain of unknown function DUF1193 |
|
| InterPro |
IPR024868 |
Protein four-jointed |
|
| Pfam |
PF11026.3 |
Protein of unknown function (DUF2721) |
0.067 |
| Pfam |
PF09726.4 |
Transmembrane protein |
0.14 |
| Pfam |
PF06702.7 |
Protein of unknown function (DUF1193) |
6.3e-08 |
| Pfam |
PF09323.5 |
Domain of unknown function (DUF1980) |
4.3 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| A. gambiae |
AGAP008093 |
| P. vanderplanki |
Pv.05582 |
| B. mori |
BGIBMGA011114-TA |
| D. plexippus |
DPOGS203449PA |
| C. quinquefasciatus |
CPIJ801666 |
| M. musculus |
ENSMUSG00000075012 |
| H. sapiens |
ENSP00000400223 |
| T. castaneum |
TC015492 |
| P. humanus |
PHUM596540-PA |
| A. aegypti |
AAEL010745 |
| H. melpomene |
HMEL009511-PA |
| D. melanogaster |
FBgn0000658 |