MidgeBase gene description page [Pn.02894]
Outline
| Gene ID | Pn.02894 |
| Type | Protein coding gene |
| Scaffold | PnScaf2497 |
| Start | 70593 |
| End | 71093 |
| Direction | + |
Sequence
Transcript: 261 (bp)
ATGACGAAGCCTACTCTCTACTATCATCTCGCAAGTCCACCTGCCCGCGCGACCGTTCTAGTTGCCAAGGAACTCGGCTTAGACATCGAGTTAAAAGAAGTTGATTTGCTGCACTTGGAAAACAAGAGCGAAGCCTACACGAAAATCAATCCAGCGCAAACCGTTCCGGCACTTGTTGATGGCAACATTTTAGTTTGTGATAGCCACGCGATCTGTTTGTACATGATTGAGAAATTTGCCAAAGACGACAACTTGTACCCC
Protein: 87 (aa)
MTKPTLYYHLASPPARATVLVAKELGLDIELKEVDLLHLENKSEAYTKINPAQTVPALVDGNILVCDSHAICLYMIEKFAKDDNLYP
| Type | Start | End | Length |
| CDS |
70593 |
70627 |
35 |
| CDS |
70690 |
70749 |
60 |
| CDS |
70809 |
70857 |
49 |
| CDS |
70917 |
70975 |
59 |
| CDS |
71033 |
71090 |
58 |
| intron |
70628 |
70689 |
62 |
| intron |
70750 |
70808 |
59 |
| intron |
70858 |
70916 |
59 |
| intron |
70976 |
71032 |
57 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
ACP27604 |
glutathione S-transferase [Chironomus tentans] |
4e-28 |
| InterPro |
IPR012336 |
Thioredoxin-like fold |
|
| InterPro |
IPR004045 |
Glutathione S-transferase, N-terminal |
|
| Gene Ontology(MF) |
GO:0005515 |
protein binding |
|
| Pfam |
PF14320.1 |
Phosphoprotein P region PCT disordered |
0.074 |
| Pfam |
PF13409.1 |
Glutathione S-transferase, N-terminal domain |
2.4e-11 |
| Pfam |
PF02798.15 |
Glutathione S-transferase, N-terminal domain |
3.8e-10 |
| Pfam |
PF13417.1 |
Glutathione S-transferase, N-terminal domain |
3.7e-14 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes