MidgeBase gene description page [Pn.02892]
Outline
| Gene ID | Pn.02892 |
| Type | Protein coding gene |
| Scaffold | PnScaf2497 |
| Start | 64322 |
| End | 64907 |
| Direction | + |
Sequence
Transcript: 456 (bp)
ATGACAGTGCAGGATACGCTGAGGTTCGAGAACGATGTCTTGCGAGGCTACATCACATGGGGCGGCATCTTGCTGATCAAGATGCTGCTCATGAGTTTCCTCACCGGCATCAACCGCTTCCGCAAGGGTGCCTATGAGAACCCCGAAGACATCCAAGGGCGCGAGAATGTCGAGATCAAGAAAGACGAGGATGTGGAGAGAGTCAGACGCGCTCATCTCAACGATCTCGAGAACATCCCGGCCTTTCTCTTCGCCGGCCTGCTCTACGTGTTCTCCGAGCCGAACGTCGACCTGGCTCTGTGGCTCTTCCGCATCGGAGTTCTCGCTCGGATCGGGCACACGATTGTCTATGCCGTCTATCCAGTTCGTCAGCCGGCCAGAGGCCTGTGCTTCATGATCACGACCCTCATAACTCTATTCATGATCGTGGCATCGATCGTCGCATTCTTTCACATT
Protein: 152 (aa)
MTVQDTLRFENDVLRGYITWGGILLIKMLLMSFLTGINRFRKGAYENPEDIQGRENVEIKKDEDVERVRRAHLNDLENIPAFLFAGLLYVFSEPNVDLALWLFRIGVLARIGHTIVYAVYPVRQPARGLCFMITTLITLFMIVASIVAFFHI
| Type | Start | End | Length |
| CDS |
64322 |
64450 |
129 |
| CDS |
64520 |
64735 |
216 |
| CDS |
64794 |
64904 |
111 |
| intron |
64451 |
64519 |
69 |
| intron |
64736 |
64793 |
58 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_002428068 |
Microsomal glutathione S-transferase, putative [Pediculus humanus corporis] gb|EEB15330.1| Microsomal glutathione S-transferase, putative [Pediculus humanus corporis] |
1e-32 |
| InterPro |
IPR023352 |
Membrane associated eicosanoid/glutathione metabolism-like domain |
|
| InterPro |
IPR001129 |
Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein |
|
| Pfam |
PF03579.8 |
Small hydrophobic protein |
2.4 |
| Pfam |
PF01124.13 |
MAPEG family |
1.3e-25 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
| Gene ID |
| Pn.02893 |
| Pn.02888 |
| Pn.02886 |
Orthologous genes
| Species |
Gene ID |
| H. melpomene |
HMEL011757-PA |
| S. invicta |
SI2.2.0_09079 |
| A. aegypti |
AAEL006829 |
| N. vitripennis |
NV17980-PA |
| C. quinquefasciatus |
CPIJ012755 |
| C. quinquefasciatus |
CPIJ012754 |
| A. aegypti |
AAEL010157 |
| T. castaneum |
TC011646 |
| H. sapiens |
ENSP00000379512 |
| H. sapiens |
ENSP00000010404 |
| A. gambiae |
AGAP000165 |
| A. mellifera |
GB12371-PA |
| P. humanus |
PHUM361810-PA |
| P. vanderplanki |
Pv.08047 |
| D. melanogaster |
FBgn0053178 |
| T. castaneum |
TC009128 |
| H. sapiens |
ENSP00000379513 |
| D. plexippus |
DPOGS208645PA |
| A. gambiae |
AGAP000163 |
| C. quinquefasciatus |
CPIJ015233 |
| B. mori |
BGIBMGA007779-TA |
| T. castaneum |
TC009129 |
| H. sapiens |
ENSP00000379510 |
| C. quinquefasciatus |
CPIJ018241 |
| M. musculus |
ENSMUSG00000008540 |
| D. melanogaster |
FBgn0025814 |
| P. vanderplanki |
Pv.08041 |
| P. vanderplanki |
Pv.08045 |
| D. melanogaster |
FBgn0053177 |
| C. quinquefasciatus |
CPIJ012756 |