MidgeBase gene description page [Pn.02887]
Outline
| Gene ID | Pn.02887 |
| Type | Protein coding gene |
| Scaffold | PnScaf2497 |
| Start | 57047 |
| End | 57681 |
| Direction | + |
Sequence
Transcript: 459 (bp)
ATGTCGATCGTTGAAATTTTGAGCACCGAGAATCCGGTTTTTAACGCTTATGGCTTCTGGGCCAGTGTTTTGGTCCTGAAAGTCCTGGCCATGGCCGTGTTCACCTCAAACGTTAGGAAGTCAAAGAAGGCCGTCCCAAACAAAGAGGATCTGATGTTTCTGCCGGAGGATCAGAGGAACGTCGACGTCGTCACAGACGATCCAGACGTCGAAAGAGTGCGCCGAGCTCACTTGAACGATCTAGAAAACTGTGTGCCATTCTTGATTATCTCGTTCGTTTATATTCTGACAAATCCCAATGCCTTTATCGCCGTCAACCTGATCCGCTTTTCGGTGATTGCAAGAATCGTGCACACGTACTCGTATCTGAATGCATTGCAGCCGTACCGCGCTTACGGTTTCGCCCTGCCATTCATCGTCATGATCTACATGAGCATCAGCAACGTCCTGTATTTCTTC
Protein: 153 (aa)
MSIVEILSTENPVFNAYGFWASVLVLKVLAMAVFTSNVRKSKKAVPNKEDLMFLPEDQRNVDVVTDDPDVERVRRAHLNDLENCVPFLIISFVYILTNPNAFIAVNLIRFSVIARIVHTYSYLNALQPYRAYGFALPFIVMIYMSISNVLYFF
| Type | Start | End | Length |
| CDS |
57047 |
57175 |
129 |
| CDS |
57235 |
57329 |
95 |
| CDS |
57384 |
57423 |
40 |
| CDS |
57484 |
57678 |
195 |
| intron |
57176 |
57234 |
59 |
| intron |
57330 |
57383 |
54 |
| intron |
57424 |
57483 |
60 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001991177 |
GH12207 [Drosophila grimshawi] gb|EDV99801.1| GH12207 [Drosophila grimshawi] |
1e-31 |
| InterPro |
IPR023352 |
Membrane associated eicosanoid/glutathione metabolism-like domain |
|
| InterPro |
IPR001129 |
Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein |
|
| Pfam |
PF01124.13 |
MAPEG family |
3e-22 |
| Pfam |
PF10852.3 |
Protein of unknown function (DUF2651) |
8.7 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| P. vanderplanki |
Pv.08046 |