MidgeBase gene description page [Pn.02804]
Outline
| Gene ID | Pn.02804 |
| Type | Protein coding gene |
| Scaffold | PnScaf2421 |
| Start | 148716 |
| End | 155555 |
| Direction | - |
Sequence
Transcript: 4446 (bp)
ATGATCAAATTAAAGTCGCTGTTCCGCAGAGGACAACAGTCGAGTCCGTCTGCGACGTCGAGTTCGTCGAAGCAAAATCATCAAATTTCGCCGGCACACTCGGTCGGCCTAAAGACTTCCGCTTCGGCATCGAGTCTTGATCGTGCCGACGTCAACGCCGGAAGTGCGTCGGCAGACCTCGGAGCAACGAGAAAGCTATCGAAGGGCCACAAGCAGTCGTCAAAGGACAAGCTTAATGACTTGCTGCGTGTCGCGTCCAAAGAAAAGCTAATTGATGAGAAGAAGGAGTTGAAGAAGCAACAGAAGTTACAGCAGAAACAAATGCAGCAAGTAGCTCAGCAGTCGGCAAATGTCCACCTACCGTCATCGTCCGTAGTCGCTGCGACTGGACATTTGCCAAACAACCAGCACTCAGGTCGTTCAAATTCCAAAGATTTCGATGTCGTTACGTACGATGAGGTTCAAGACATAAGACACAAGCAAACGATGCAAGAACTCCTTCAATTGCAGCAGGAGAATGCCAGTTTAGAAATCAAGATTAAAGAGCTGACAACATCACATAACGAATTATTGCTGTTGCGCAAAGACATTCAGAAACTCCAGCAGACGAATGAAATGAATAATTCAAAGCTAAACCAACTCGAGGAGGAGAACGAGTCGTTGCGAATGCGCTTGAGAAATGTCGTTCAGTCGCCGCTATCTGATGCCGAGAAGCAGCAAATGATCGACGACGGTCGCCAGCGCCACCACAGCTCCTCCGCTCCAGCCTCCATCTCCATGACGCTCCCGAACCTCGCACCGAGCAGCACAGAAATGGACGCATCGTGCGCAACGACTCCCGACTGGGACAAGCAGTCGTCGAGCAGCGAGGTCTCGGTGGCGTGTCTTCAGGACAAAATCATCCAAATGGAGGAGACGCACCACTCGACGAACGAGGAGTTGCAAGCGACTCTGCAGGAGCTGGCCGATCTCCAGAATCAAGTACTGGAGCTGCAGAACGACAACGAACGCCTCTCGGACGAGAAAGACGTGATTTTCCAAACGCTCTGCCGTCAGACGGAGAAGCTGGAGGACACGCGCAATCAGGTCGAGACGCTGCAGAAATTGCTGCTTCGTGATCCGAGCAATCAGCAAGACTCGGCCTCGTCGGAGCGCGAGCAAAAACTCATGGATTTGTTGAAGAATGCGCAAGAGGAACGCGAGACCTTAATGATTAAATTAGAGGAATTGAATTCGGACTTGAACGATAAGAATCAATTGACGGAGACGTTTCAATTGGACACTAATCGCCTGAAGGAGAGAATTAGCGTGCTCGAGTCGACAATCGATGCCTCGACGGCGGATCGCAAGGAAATCGAGCGCCAATTGAGCGCCACGAAAGAAGAGGCGTCGTCGAAGCAAATTGAAATCAGCCGACTGACGACGCTCTTGGAGAACGCTCGCTCGAAGATCGAGGAGATTGAGCAAGACAGAGCCCTCGGCGAGAAGTCCGACTTGGGCGAGCTTTTGGATATTGCACGCAAGGAAAAAGATTATCTCGAGATCGAAATCACGAGCTTGCAAGAGCAATTGTCGAAGAGTCAGAATGAGACACAAAAGTTGCGTGACCAGCTGGCCGGCATAACGGAAGAGTGCAAAGTTACCCGCAACAACGCCAAATGCGCGCTGAGCGATTTGGAGTACAAGTACGAGCAGCTGAAGCAGGAGAAATTGAAAATTCAAACCGACTATCAGATTCTCGTCGATACGACCAATGAACTTCAGATCCAAATTAAATGCTTGGCAGAGGACAAAGCTCAATTGGAGACGCTCTACTCTGAGACGCAGCGTCACTTGGTCGAGACCGAGCGACAATTGGCCGACACGAAGGAGAAGCTCGACAGCGAAATTCACGCTCGCAAACTGGAGAACGAAGAGTGGGAGCAGTTCCAGCAAGACCTCCTCGTCTCGGTGCGTGTCGCTAACGACTTCAAGACGGAGGCTCAGCAAGCCCACGAACAATTGGCGCTGGACAACAAGCAATTGCGTGAAAAAATTCGCGGAATGGAGTCACAAATTGATAAACTCAACAAGCCAAATGAGTGCACAATTGTTGAGTTCCACCCGAAATTGCATGCACCATCGTCCAATGATAAACAAGAGACTACAATGCAAGAAAAAGATAGCGACGCCGACGATTTCTTGCTGGAGTTGTCGCGCATGCGAAACTCCTTGAACGCCCTTACGCTCAAGAACTTCATGTTCGACAATGCCAAGGGCTTCGATAACGAGGAGGAGGAGGAGATTATCAGAATGGAGATAAAGGAAGTGCCGACTCCGCAAGAGCCGGCAGACGCGGTCGATTCTGCAGTGGCTGATCACCCGATCAGTTTCCGGCGAAGTCTCTCGAAGCATCGACAAGAGGGCATCAGAACGCAGAGCGGCTTAATTAGCCACGATGATGTTATTAAAGCCATAAACGAAAGCCAAGAGAAACTTAATGAATCGGCGAAAATTAAATCAAAAGTTCACTTCGCTCTCGGGAAAGAAGAAGAAGAAGAAGCGCCGGCAGTTGTTGTGAATGATGAGAGTTTATCTAAAAGCGGCATAAGCCAACCCAAATTGCTGTTGAAAGGCACATCGCGCGAGTCCGATGAGGTTGCTACAATTAATGAATTACCGTGGCAAAAGCATCGTGAATACAAAACTGTAACGCCATTCTACAGGCAAAAGAAGAAAACCACTGCCATCACCACCACCACCATCACCAAAAACAACGACAGCAACAACAACAACATCAGCAACAGCAGTGAACAAGTTAAAGCGCTGAGCAGCGAGAATGTAGCGCGAAAGGTGCCGAAGGAAATCACTTTCCGGCCAATCGAGAGCAGCAAGAGCATCGAAGATATCGAGAAGCAAATCGTTCGACCTGTGCCGCTTTTCGCGTCGAAAAGCTATCAAGAGTTGCCGACTCCGAAGAGCCTGGGCTCGTTCGAAGACGACTTCATCACGAAGTCGAGCGATGATTTGCTGTTCGATAACATCGACGGTACGCACCGCATAAAGGAGAGCAAGACGCGCAAACTGCTGCGACTTCGAAGCACCAGCAACAGCAGCCTCAATCGATCGAGCGAGCAGATCGTTTACGAGAACCTAAATTATGAGGTTCCCCTCTCGGCCGATAATGTTACGATGAGAAAGAAGCAAAAGCCGCCGATGCCGCAACCGCGATTGAGTGCCGAGATAACGAGCAGCAGAAAGAGCCTCCTCAACAATAGCACCGGTGATTTGAGACCGCGGCCAACGACCAAGACAATAGTCTACGTTTTGGACAAAACGAAAGACGAATTCGTTCTCCAAACTCCTCCCGACTCGCTCGACGAGAATGCATACGAGACGGTGTTGTATGAGAACAATGTCGATAAGCACACTGATTCGAATTTGTTTAATTCCCTGCTATCCTCTCGCGATGATTTGGTAACATCATCGAATGAATCGCAGCAATCCATTCTGACGACCGTTCAGCAAGAAATGGCGCAGCGCAGAAAGCAGAAAAGTAACGGAAATGCCGTGAAGAATGGAACCACCAACGGCAGCAGCAACAACATCTCGACAAACAATAATGGAATCGTCGCGAACACAGTCTCGTACATCACTCGTCAAGACTCGCGCCTGTCGGTGAAGAGTCTCATCGAGAGCATCGAGAACACGTCGAAGCAGACGAAGGTGTCGACGTCGGACTCGCAATCGGGCTCGCAGACGAGTCTCAACAATTTGTCGGTTATTGAGCAGCAGGAGCCGCTTCAGCAACAACACCAGCCGCAGCAACAACAGCAGAGTGAGAAGATAACGAGCGCAATCGATCAAGAGAAGCAACAAAAGAATTTGAATAATAATTCCATCACCAATAATCACAACAATATTCTCACGACGTCAAACAATGTTAATGTGAACGGAACGCAAAAGAGTGGAGTGACAATTCCACAAAAGACTGACGATCAATTTTATTCATCGATTTTAACATCACACAAGCACGATTACAACTTGAATCTGAATCACAAGCATGACTATGTGAGACGAAACAGCTACGGCGATATATGCGAACGAAAAGATCCACTGAATGCATTAGTGAAGAACGGCGGGTCGAAGCGAAACGCTCTGCTCAAATGGTGTCAGAACAAAGTCGTCGGTTACCGAAATATCGACATCACCAACTTCAGTTCGTCATGGAATGACGGCTTGGCACTGTGCGCACTCATGCACTCGTATCTGCCAGACAAGATTCCGTACGACGAGCTGACACCGCAGGACAAGAAGAGGAACTTCAGCCTGGCATTCGATGCCGCTGAATCGCACGGTATCAAAACAACACTGAATATCAATGAGATGTGTCAACAAGAGAGACCCGACTGGCAATCAATAATGTCATACGTGACGCAAATCTACAAACATTTCGAGACGCAACCT
Protein: 1482 (aa)
MIKLKSLFRRGQQSSPSATSSSSKQNHQISPAHSVGLKTSASASSLDRADVNAGSASADLGATRKLSKGHKQSSKDKLNDLLRVASKEKLIDEKKELKKQQKLQQKQMQQVAQQSANVHLPSSSVVAATGHLPNNQHSGRSNSKDFDVVTYDEVQDIRHKQTMQELLQLQQENASLEIKIKELTTSHNELLLLRKDIQKLQQTNEMNNSKLNQLEEENESLRMRLRNVVQSPLSDAEKQQMIDDGRQRHHSSSAPASISMTLPNLAPSSTEMDASCATTPDWDKQSSSSEVSVACLQDKIIQMEETHHSTNEELQATLQELADLQNQVLELQNDNERLSDEKDVIFQTLCRQTEKLEDTRNQVETLQKLLLRDPSNQQDSASSEREQKLMDLLKNAQEERETLMIKLEELNSDLNDKNQLTETFQLDTNRLKERISVLESTIDASTADRKEIERQLSATKEEASSKQIEISRLTTLLENARSKIEEIEQDRALGEKSDLGELLDIARKEKDYLEIEITSLQEQLSKSQNETQKLRDQLAGITEECKVTRNNAKCALSDLEYKYEQLKQEKLKIQTDYQILVDTTNELQIQIKCLAEDKAQLETLYSETQRHLVETERQLADTKEKLDSEIHARKLENEEWEQFQQDLLVSVRVANDFKTEAQQAHEQLALDNKQLREKIRGMESQIDKLNKPNECTIVEFHPKLHAPSSNDKQETTMQEKDSDADDFLLELSRMRNSLNALTLKNFMFDNAKGFDNEEEEEIIRMEIKEVPTPQEPADAVDSAVADHPISFRRSLSKHRQEGIRTQSGLISHDDVIKAINESQEKLNESAKIKSKVHFALGKEEEEEAPAVVVNDESLSKSGISQPKLLLKGTSRESDEVATINELPWQKHREYKTVTPFYRQKKKTTAITTTTITKNNDSNNNNISNSSEQVKALSSENVARKVPKEITFRPIESSKSIEDIEKQIVRPVPLFASKSYQELPTPKSLGSFEDDFITKSSDDLLFDNIDGTHRIKESKTRKLLRLRSTSNSSLNRSSEQIVYENLNYEVPLSADNVTMRKKQKPPMPQPRLSAEITSSRKSLLNNSTGDLRPRPTTKTIVYVLDKTKDEFVLQTPPDSLDENAYETVLYENNVDKHTDSNLFNSLLSSRDDLVTSSNESQQSILTTVQQEMAQRRKQKSNGNAVKNGTTNGSSNNISTNNNGIVANTVSYITRQDSRLSVKSLIESIENTSKQTKVSTSDSQSGSQTSLNNLSVIEQQEPLQQQHQPQQQQQSEKITSAIDQEKQQKNLNNNSITNNHNNILTTSNNVNVNGTQKSGVTIPQKTDDQFYSSILTSHKHDYNLNLNHKHDYVRRNSYGDICERKDPLNALVKNGGSKRNALLKWCQNKVVGYRNIDITNFSSSWNDGLALCALMHSYLPDKIPYDELTPQDKKRNFSLAFDAAESHGIKTTLNINEMCQQERPDWQSIMSYVTQIYKHFETQP
| Type | Start | End | Length |
| CDS |
148719 |
148811 |
93 |
| CDS |
148883 |
149027 |
145 |
| CDS |
149102 |
149231 |
130 |
| CDS |
149301 |
149426 |
126 |
| CDS |
150360 |
150857 |
498 |
| CDS |
151400 |
152779 |
1380 |
| CDS |
152899 |
153208 |
310 |
| CDS |
153315 |
154286 |
972 |
| CDS |
154358 |
154681 |
324 |
| CDS |
155088 |
155555 |
468 |
| intron |
148812 |
148882 |
71 |
| intron |
149028 |
149101 |
74 |
| intron |
149232 |
149300 |
69 |
| intron |
149427 |
150359 |
933 |
| intron |
150858 |
151399 |
542 |
| intron |
152780 |
152898 |
119 |
| intron |
153209 |
153314 |
106 |
| intron |
154287 |
154357 |
71 |
| intron |
154682 |
155087 |
406 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001652575 |
paramyosin, putative [Aedes aegypti] gb|EAT41172.1| paramyosin, putative [Aedes aegypti] |
0.0 |
| InterPro |
IPR001715 |
Calponin homology domain |
|
| Gene Ontology(MF) |
GO:0005515 |
protein binding |
|
| Pfam |
PF00307.26 |
Calponin homology (CH) domain |
3.6e-21 |
| Pfam |
PF11971.3 |
CAMSAP CH domain |
3.7e-08 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| H. sapiens |
ENSP00000378896 |
| H. sapiens |
ENSP00000405671 |
| H. sapiens |
ENSP00000378900 |
| N. vitripennis |
NV50004-PA |
| H. sapiens |
ENSP00000378893 |
| H. sapiens |
ENSP00000438294 |
| A. gambiae |
AGAP002688 |
| T. castaneum |
TC015024 |
| M. musculus |
ENSMUSG00000042331 |
| C. quinquefasciatus |
CPIJ002902 |
| D. melanogaster |
FBgn0025633 |
| H. sapiens |
ENSP00000378901 |
| P. humanus |
PHUM448400-PA |
| H. sapiens |
ENSP00000351480 |
| A. aegypti |
AAEL007151 |
| C. quinquefasciatus |
CPIJ002900 |
| B. mori |
BGIBMGA013032-TA |
| H. sapiens |
ENSP00000261503 |
| M. musculus |
ENSMUSG00000033444 |
| T. castaneum |
TC015023 |
| B. mori |
BGIBMGA013034-TA |
| H. sapiens |
ENSP00000325785 |
| H. sapiens |
ENSP00000439633 |
| H. sapiens |
ENSP00000462471 |
| A. mellifera |
GB17698-PA |
| S. invicta |
SI2.2.0_14034 |
| P. vanderplanki |
Pv.09580 |
| H. sapiens |
ENSP00000378898 |
| H. sapiens |
ENSP00000393363 |
| D. plexippus |
DPOGS207077PA |
| P. vanderplanki |
Pv.16024 |
| H. melpomene |
HMEL014045-PA |