MidgeBase gene description page [Pn.02605]
Outline
| Gene ID | Pn.02605 |
| Type | Protein coding gene |
| Scaffold | PnScaf2218 |
| Start | 78209 |
| End | 80608 |
| Direction | - |
Sequence
Transcript: 1467 (bp)
ATGGGCAGTCCAAATCAAGAAATCAAGTACACACAGCTTTTTATCAACAATGAGTTTGTTGATTCCGTGAGCAAGAAGACATTCGTGACGGCAAATCCCGCTAATGGAAAGAAACTCGCAGACGTTGCCGAGGGAGACAAAGCAGATGTCGATTTGGCTGTCGAGGCTGCGAAGAAGGCTTTCGCTCGCGGCTCCGAATGGCGCAACATGGATGCATCGGCTCGCGCAAAGTTGATGCACAAACTCGCCGACTTGATCGAGCGCGACGTCAAAATCATCGCGAGCATCGAGTCGCTAGATAATGGAAAGCCATTTGCAATGGCGCAAATGGACACCTATTTCTGTGCCATTTTGCTGCGCTACTACGCCGGCTATGCTGACAAGATCCACGGTCGCACGGTCCCGACTGACGGGCCATTCTTCTCGTACGTCCGCAAGGAGCCGATCGGAGTTTGCGGCCAAATTATTCCGTGGAATTATCCCGCACTCATGGCGGTCTTCAAGATCGCACCAGTTCTCGCAACTGGCTGCGTTTCCGTTCTCAAGCCGGCTGAGCAGACGCCGCTGAGCGCTCTGTACATCGCATCTCTCGTCAAAGAAGCCGGCATTCCTGCTGGCGTCATCAACATGGTCACCGGCTACGGACCAACAGCAGGCGGTGCAATTTCATCACACCCAGACATCCGTAAGGTCGCCTTCACTGGATCGACCGAGGTCGGCAAGATCATCATGGAAGCAGCCGCGAAATCAAATCTGAAGAAGGTTTCGCTCGAGCTCGGCGGAAAGAGCCCGTTGGTCATCTTCGAAGACGTCAACTTGGACGAAGTGGTGCCGCTCGCACAAGACGCCATTTTCACAAACTCAGGCCAAATTTGCTGCGGCGGCTCGCGAACATTCGTGCACGAGAGCATCTATGACGAGTTTGTGAAGAAGACCGTTGAGAACGCGAAGAAGCGAAAGGTCGGCTGCCCGTTCAGCGCTGACACGCTACAGGGTCCGCAGGTCGATCAGGACACGTTCGACAAAATCCTCAAGTACATCGAGTACGGAAAGCAGGACGGCGCAAAGCTGGAGATTGGCGGCAAGCGCTGGGGCAGCGAGGGTTTCTATATCGAGCCGACCGTCTTCTCGAACGTCACCGACGAGATGCGCATCGCTCAGGACGAGATTTTCGGGCCGGTTCAGTCGATCATCAAGTTCAAGACGATCGACGAGGTGATCGAGCGCGCCAACAACACAACCTACGGCCTCGCCGCCGGCGTCTTCACGAACGACATCAACAAGGCTCTCACATTCGCTAACGCCGTTGAAGCTGGATCAGTGTGGGTCAACTGCTACAACGCCACAAACGTTTGCTCGCCTTTCGGTGGCTACAAACAGAGCGGCATCGGTCGCGAGCTGGGAGAGGAGGGCATCAATCTCTACCTCGAGACCAAGGCTGTTGTCATCAAATTGCCCACAAAGAAC
Protein: 489 (aa)
MGSPNQEIKYTQLFINNEFVDSVSKKTFVTANPANGKKLADVAEGDKADVDLAVEAAKKAFARGSEWRNMDASARAKLMHKLADLIERDVKIIASIESLDNGKPFAMAQMDTYFCAILLRYYAGYADKIHGRTVPTDGPFFSYVRKEPIGVCGQIIPWNYPALMAVFKIAPVLATGCVSVLKPAEQTPLSALYIASLVKEAGIPAGVINMVTGYGPTAGGAISSHPDIRKVAFTGSTEVGKIIMEAAAKSNLKKVSLELGGKSPLVIFEDVNLDEVVPLAQDAIFTNSGQICCGGSRTFVHESIYDEFVKKTVENAKKRKVGCPFSADTLQGPQVDQDTFDKILKYIEYGKQDGAKLEIGGKRWGSEGFYIEPTVFSNVTDEMRIAQDEIFGPVQSIIKFKTIDEVIERANNTTYGLAAGVFTNDINKALTFANAVEAGSVWVNCYNATNVCSPFGGYKQSGIGRELGEEGINLYLETKAVVIKLPTKN
| Type | Start | End | Length |
| CDS |
78212 |
78861 |
650 |
| CDS |
79186 |
79760 |
575 |
| CDS |
80072 |
80277 |
206 |
| CDS |
80573 |
80608 |
36 |
| intron |
78862 |
79185 |
324 |
| intron |
79761 |
80071 |
311 |
| intron |
80278 |
80572 |
295 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001648014 |
aldehyde dehydrogenase [Aedes aegypti] gb|EAT33638.1| aldehyde dehydrogenase [Aedes aegypti] |
0.0 |
| InterPro |
IPR016161 |
Aldehyde/histidinol dehydrogenase |
|
| InterPro |
IPR015590 |
Aldehyde dehydrogenase domain |
|
| InterPro |
IPR016162 |
Aldehyde dehydrogenase, N-terminal |
|
| InterPro |
IPR016160 |
Aldehyde dehydrogenase, conserved site |
|
| InterPro |
IPR016163 |
Aldehyde dehydrogenase, C-terminal |
|
| Gene Ontology(BP) |
GO:0008152 |
metabolic process |
|
| Gene Ontology(BP) |
GO:0055114 |
oxidation-reduction process |
|
| Gene Ontology(MF) |
GO:0016620 |
oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor |
|
| Gene Ontology(MF) |
GO:0016491 |
oxidoreductase activity |
|
| Pfam |
PF00171.17 |
Aldehyde dehydrogenase family |
1.7e-179 |
| Pfam |
PF09176.6 |
Methylene-tetrahydromethanopterin dehydrogenase, N-terminal |
0.012 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
| Gene ID |
| Pn.02606 |
| Pn.16375 |
| Pn.14631 |
Orthologous genes
| Species |
Gene ID |
| C. quinquefasciatus |
CPIJ003432 |
| A. aegypti |
AAEL014080 |
| D. plexippus |
DPOGS205397PA |
| H. sapiens |
ENSP00000438296 |
| H. sapiens |
ENSP00000309623 |
| H. sapiens |
ENSP00000366927 |
| D. plexippus |
DPOGS201994PA |
| S. invicta |
SI2.2.0_09189 |
| A. aegypti |
AAEL009948 |
| D. melanogaster |
FBgn0012036 |
| P. vanderplanki |
Pv.08659 |
| P. vanderplanki |
Pv.15929 |
| M. musculus |
ENSMUSG00000035561 |
| H. melpomene |
HMEL007157-PA |
| P. vanderplanki |
Pv.07174 |
| H. sapiens |
ENSP00000453600 |
| A. aegypti |
AAEL009029 |
| A. gambiae |
AGAP009944 |
| H. sapiens |
ENSP00000343294 |
| P. vanderplanki |
Pv.03182 |
| H. sapiens |
ENSP00000261733 |
| H. sapiens |
ENSP00000297785 |
| N. vitripennis |
NV15139-PA |
| M. musculus |
ENSMUSG00000024747 |
| H. melpomene |
HMEL002628-PA |
| M. musculus |
ENSMUSG00000013584 |
| H. sapiens |
ENSP00000448839 |
| P. humanus |
PHUM222120-PA |
| A. gambiae |
AGAP003652 |
| A. mellifera |
GB12741-PA |
| A. gambiae |
AGAP003578 |
| H. sapiens |
ENSP00000403349 |
| H. sapiens |
ENSP00000447231 |
| D. plexippus |
DPOGS201995PA |
| P. vanderplanki |
Pv.00051 |
| D. melanogaster |
FBgn0051075 |
| C. quinquefasciatus |
CPIJ007198 |
| B. mori |
BGIBMGA010403-TA |
| A. mellifera |
GB18004-PA |
| H. sapiens |
ENSP00000332256 |
| N. vitripennis |
NV16312-PA |
| P. humanus |
PHUM307790-PA |
| H. sapiens |
ENSP00000249750 |
| M. musculus |
ENSMUSG00000053279 |
| B. mori |
BGIBMGA002457-TA |
| M. musculus |
ENSMUSG00000015134 |
| T. castaneum |
TC011192 |
| N. vitripennis |
NV15140-PA |
| H. sapiens |
ENSP00000453408 |
| T. castaneum |
TC000960 |
| D. plexippus |
DPOGS208887PA |
| S. invicta |
SI2.2.0_15120 |
| C. quinquefasciatus |
CPIJ014581 |