MidgeBase gene description page [Pn.02567]
Outline
| Gene ID | Pn.02567 |
| Type | Protein coding gene |
| Scaffold | PnScaf2190 |
| Start | 12642 |
| End | 16140 |
| Direction | - |
Sequence
Transcript: 2472 (bp)
ATGGACTTGCAAGTTTATGCAATTATTTTGATCGTATTTTTGGTGTCATTTATGTCGTATCTGTTCATATCAAAGTTTCTGCCACATGGCAAAACTTTTGATGAAATGATCGCAGAGAAGAAACGAATTCGTGAGGAAGTTCTTGGGACGTTGAAATCGTCGAGTGGAAAGCACAGCAACGCGAGCAACAAGAAGAAGCCGAAGAAAGAAACGAAGAAGAAAGAAGTTCAGCCGAAAGTTGTCAAAGAGATAACTAGCAATGAATCGGACGTTTCGGAAGAGTCGTCGGAAGCAAACCGTTCTGAGCCAGCTACGCCACCTGAAGTTCCACGCAAGCAAACAACAGCGACGGTCAAGACTCAAGCTACCAGTGGCAACAACAAAAAGGGAAAGGCAGGCAAAGGAGGCATTTTGATTAACAAGAATGAGCCGACTATGGTGAAGGAGAATGAGAGCATTGGAGAGGTCAATCACTTTGTCGAGATTCATCCAAAAGATGCTGTTGAAATACACCGTGGAAAGGAAGAGGAGAAGACTACAAAAAATTTCCGCGAGAACAAGAAATCTAAGCAGGCAGCAAAAGAGACACCTCCTGTTTCTCCCAAAAATCAGCCCGTCAAAGAGACTAAGCCAGTCGAAGAGAAGGTTGTCCAGAAGAGAAACAAAAAATCGGAACAATCGTCGGCACGAATCATTGCTGGTAGTTCATTGAAATTTGTTACTGACGAGACCGGAATTACACCATTAATTCGTGAATTGAGCGCTGCCGAGTTGACAAAGAATCAAATTCAAGTATTGATCGACTTCCTTCTCAACAAGCAATCGGACACGACTGCTAAAGATCCGACTGAATGGACCGAGGGAAAGTCCGATTTAATGCAAAAATTAAAGAAGCAGTTGCAAGAGAAGGAGGCACAGTTGAAGAATGAGCAAGATGCATTGTCCGGCATGCAAATTAAGCTGAAAGAATTGCGTACGGAATTAAACACTGAGAAAATTCAGAGTAATGCCACTTTGAAAGCGCAGTTGGAGCAAATTCAAAATTTCAAGTCTGAAATCAAGACCTTGCAATCTGAAATTCAGTTTTTGAATGACAAGCATAATAATGAAAAACAGACGTTGAATCTTTCGCTGAAACAGCTGCAAGCAAAATACTTGCAAGTCTCGGAGAGTTTGAAGGCACAAGAGAGTTTGCCAAATATTCAGCAAATTCAAAATGAAAATCAAGTACTACAGCAAGAAATCATCAACAAGAATCAACAGATAATGGAAATTAAAGTTTTGATTGACCAGAAAGAAGCGGCGTTGAGTGAGCGTGACAACAAGCTAACAGAGTACGACGTTTGTCTCCGTCAAAAGGATGAAACTTGCAAGTTTGTCGAAAATGAATTGAGACAACGAGTCCAAGACGTTTCGAATCGTGATGGTGAGATTCAGAAGTTAAATGCTGAAGTTACACGCGTGAAGGATATTTTGCAAAGACAAACTGTGGAAGTTGATCAATTGAAGCAGCAAGTCAACGAATATCATCAGAACAATCATGCAGAAGAGAATAACAAGATTGAAATTAGAAATCTCCAAAATGCACTTGATTCTAGTAAGAAAGAATTGGAAGCTCAAAGTGCGCTGATCGTTGACTACAAGAGAAAGCTAGAGGATCTGAGTAAGCAGTTAGAAGCGAAGTCAGCACAGAAAGCTGCTGGTGATAACTTTTTGCTTAACGAAAAGATTAACGAAATGGTCGCAAATCATCAGAACATTATCAGTGAAAAGGATAAGCAGTTAGTAGAATATCAGAAGCAAATTGACGTGCTTCAAAAGGCTGAACGAGAGCTTTCAAAGCAAATTGAGGAGCAAAAAGTGAAGAACAATGATTTACGAATGAAGAATTGGAAATTGGTTGAAGCTCTACAAGCCGCACAAAGCTCGTCAATAAAATCAACAAATCACTCCAATTCTATTGCGCAGCCCTCAGTTGACGCAAAGAAAGTAAAAGATCTTATCGTAAGACATTTTCCCGATGCAACCACTACCGCAACGTCTACAGATGGTGAGAGCCTAAATTGGCTCGAGAGCGTACTAGAGAATTTAAAAACTCAACTAGTTAGCAATAAATCAAATCACACTAGCAGCAACAGCAGCAGCACTACTTCTTCTTCTACAAACAGCGCCAATCATTTAAATAATAATAAGAATTGTAGTGATGTAGAAAAAAATAATTTAAACAATAATAGCACATTAAATGGTGATAGTAGAAATTGTTCATCATCAGCGGCCGATAATGAAATAATTTTGTTGCAAAATGCTCAACTTAAGACTACTGTGGAGGAGTATAAGAATATAATTGCAGAGACCGAAAGTATGCTGAAGAATCTTGAATCGAAAGTTCGTGAGCAGGATTCATATTGGACAAAAGTAGTGCTAATGAAAGACAACGAAATAGAGAACCTTAAAAGTCATGCACAAACATCA
Protein: 824 (aa)
MDLQVYAIILIVFLVSFMSYLFISKFLPHGKTFDEMIAEKKRIREEVLGTLKSSSGKHSNASNKKKPKKETKKKEVQPKVVKEITSNESDVSEESSEANRSEPATPPEVPRKQTTATVKTQATSGNNKKGKAGKGGILINKNEPTMVKENESIGEVNHFVEIHPKDAVEIHRGKEEEKTTKNFRENKKSKQAAKETPPVSPKNQPVKETKPVEEKVVQKRNKKSEQSSARIIAGSSLKFVTDETGITPLIRELSAAELTKNQIQVLIDFLLNKQSDTTAKDPTEWTEGKSDLMQKLKKQLQEKEAQLKNEQDALSGMQIKLKELRTELNTEKIQSNATLKAQLEQIQNFKSEIKTLQSEIQFLNDKHNNEKQTLNLSLKQLQAKYLQVSESLKAQESLPNIQQIQNENQVLQQEIINKNQQIMEIKVLIDQKEAALSERDNKLTEYDVCLRQKDETCKFVENELRQRVQDVSNRDGEIQKLNAEVTRVKDILQRQTVEVDQLKQQVNEYHQNNHAEENNKIEIRNLQNALDSSKKELEAQSALIVDYKRKLEDLSKQLEAKSAQKAAGDNFLLNEKINEMVANHQNIISEKDKQLVEYQKQIDVLQKAERELSKQIEEQKVKNNDLRMKNWKLVEALQAAQSSSIKSTNHSNSIAQPSVDAKKVKDLIVRHFPDATTTATSTDGESLNWLESVLENLKTQLVSNKSNHTSSNSSSTTSSSTNSANHLNNNKNCSDVEKNNLNNNSTLNGDSRNCSSSAADNEIILLQNAQLKTTVEEYKNIIAETESMLKNLESKVREQDSYWTKVVLMKDNEIENLKSHAQTS
| Type | Start | End | Length |
| CDS |
12645 |
12761 |
117 |
| CDS |
12834 |
13226 |
393 |
| CDS |
13454 |
13543 |
90 |
| CDS |
13805 |
13960 |
156 |
| CDS |
14040 |
14347 |
308 |
| CDS |
14549 |
14657 |
109 |
| CDS |
14716 |
15795 |
1080 |
| CDS |
15922 |
16140 |
219 |
| intron |
12762 |
12833 |
72 |
| intron |
13227 |
13453 |
227 |
| intron |
13544 |
13804 |
261 |
| intron |
13961 |
14039 |
79 |
| intron |
14348 |
14548 |
201 |
| intron |
14658 |
14715 |
58 |
| intron |
15796 |
15921 |
126 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_311831 |
AGAP003043-PA [Anopheles gambiae str. PEST] ref|XP_001688347.2| AGAP003043-PB [Anopheles gambiae str. PEST] gb|EAA44829.5| AGAP003043-PA [Anopheles gambiae str. PEST] gb|EDO64199.2| AGAP003043-PB [Anopheles gambiae str. PEST] |
1e-105 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| A. aegypti |
AAEL004452 |
| D. melanogaster |
FBgn0038535 |
| C. quinquefasciatus |
CPIJ014365 |
| A. gambiae |
AGAP003043 |
| P. vanderplanki |
Pv.06164 |