MidgeBase gene description page [Pn.02480]
Outline
| Gene ID | Pn.02480 |
| Type | Protein coding gene |
| Scaffold | PnScaf2095 |
| Start | 30922 |
| End | 31455 |
| Direction | + |
Sequence
Transcript: 531 (bp)
ATGGATGACGATCGTGATATGAGCAACAATAGCTGGATTAATCATACGGAGTTAATAATAATAGATAGAAGCACACTTAATGGATTCATATCAGTCACGCCGCTGACGCTTCTGTTCGAGAACACCACGAGCTACTTCAACCTGTCTGCTTTTGTCAATCAAAACTCGCCCAACCTCCAGCAGCAGCAGCAATCATGGATTACGATGGCTTCGCGGGTGATTCCACTCTACTCGCTCATTTTTCTTCTGGCTGTGATCGGAAACTCACTCGTTATTATGACACTCGTGCAGAACAAGCGAATGCGAACGGTGACAAACCTGTTTCTGCTCAATCTCGCCATTTCCGACCTGCTGCTCTCAATGTTCTGCATGCCGATCACCCTCGTCGGAATGCTGCTGAGGGACTTTATTTTTGGCGAAATCATGTGCAAGCTCTTGCCGTATCTTCAAGGTTTGTATCGTACGGAGAAGGTGCTCCAAATCTATCTCCGCTTAGACGTCGTTTTGATGAGAAATTTATTCTGTCTTGCG
Protein: 177 (aa)
MDDDRDMSNNSWINHTELIIIDRSTLNGFISVTPLTLLFENTTSYFNLSAFVNQNSPNLQQQQQSWITMASRVIPLYSLIFLLAVIGNSLVIMTLVQNKRMRTVTNLFLLNLAISDLLLSMFCMPITLVGMLLRDFIFGEIMCKLLPYLQGLYRTEKVLQIYLRLDVVLMRNLFCLA
| Type | Start | End | Length |
| CDS |
30922 |
31452 |
531 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001866738 |
sulfakinin receptor [Culex quinquefasciatus] gb|EDS43855.1| sulfakinin receptor [Culex quinquefasciatus] |
1e-32 |
| InterPro |
IPR017452 |
GPCR, rhodopsin-like superfamily |
|
| InterPro |
IPR000276 |
GPCR, rhodopsin-like, 7TM |
|
| Gene Ontology(BP) |
GO:0007186 |
G-protein coupled receptor signaling pathway |
|
| Gene Ontology(CC) |
GO:0016021 |
integral to membrane |
|
| Pfam |
PF00001.16 |
7 transmembrane receptor (rhodopsin family) |
5.5e-18 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
| Gene ID |
| Pn.02478 |
| Pn.12853 |
Orthologous genes
| Species |
Gene ID |
| H. sapiens |
ENSP00000437001 |
| D. melanogaster |
FBgn0030954 |
| D. plexippus |
DPOGS202645PA |
| A. aegypti |
AAEL017238 |
| T. castaneum |
TC007536 |
| C. quinquefasciatus |
CPIJ016281 |
| B. mori |
BGIBMGA010612-TA |
| D. melanogaster |
FBgn0259231 |
| P. vanderplanki |
Pv.03199 |
| H. sapiens |
ENSP00000295589 |
| T. castaneum |
TC008438 |
| C. quinquefasciatus |
CPIJ005574 |
| B. mori |
BGIBMGA001300-TA |
| C. quinquefasciatus |
CPIJ016282 |
| P. humanus |
PHUM507060-PA |
| H. melpomene |
HMEL005613-PA |
| A. gambiae |
AGAP001022 |
| A. mellifera |
GB18786-PA |
| M. musculus |
ENSMUSG00000029193 |
| A. aegypti |
AAEL010207 |
| A. aegypti |
AAEL017152 |
| P. vanderplanki |
Pv.03200 |
| S. invicta |
SI2.2.0_03447 |
| P. humanus |
PHUM615310-PA |