MidgeBase gene description page [Pn.02469]
Outline
| Gene ID | Pn.02469 |
| Type | Protein coding gene |
| Scaffold | PnScaf2076 |
| Start | 27370 |
| End | 28517 |
| Direction | - |
Sequence
Transcript: 1074 (bp)
ATGGCAGTTTTGACTTCCAACAATAATAGCGAAGCTTTTCTGCAAAATTTGGCACACATTCGAAACCAGCGAGAAAGCACGCCGGCAAACTCGAGCAATAACTCCGGTAAGAATGATGAGATTGTGCTCTTGGAAAAACAGGGCCGATCGTCTCAGAAATTGCGAAGCAATAACTTGGCACAAATTTCATCAACAATAGGACAAAACATGAACGACATTAGCAACATCGGAAGCCAGCCGAATGAATCATCAAAACTTCCGAAAATACTTTTGCCGCCTCGCAAAGACCGGCAATCGTCGGCACCGCCATCAGCGTTGCCGCGTCCGCCAAAGTCACTGAAGCCGCCGAGAAAAATCGAATACGGTCGGCTGAGTGAGACGGACTCCAATAAATCGAACAGCAAAAGTGAATACGAAATGAAAACGTCAAGCTTGAAGCGCCATCAATCGCCAGTGACGTCGACTGGATCGAAGAATTTCGTCGACATCAAGTCGGAGCTGCAGATGGCGCTGAACTCCACAAAGAACCCCCCGAAAAATTATGGAACCATAAAGAGCGACACGACAAACAACATAACTAAAATCTATTACTCCAACAAACCCGACTACTTGTCCACCAAAAACTACCAACGGCTCCCCGATTCGCCGTCCTCCGACTCCCAGAAGCGCTTCGTCACGAGCGGAAAGAAAATCACCTTTATGCGTCAGTCGCCAAGCAGCCATCAGCAGCAGCAGGCGCACCAGTCACGCGAGGGCTCCGTTTCGAGCGGTTCCAACTCGCGCTCGAGTCCGAAGAATGAGGTCACCGCGACCTATCAGCCGCTGACGCCACGCTCACGAACGCGCACGCCGCCAAAGTATTTGAATCTCAATCCTAACGTCGCCAACGGCGGAAAGCTCAACTACATGAGTCACAGCAACAACAACTCGCCGACGAAGCCCAACTTGCCGAGCTCGAGCGTCCTCCATCATACGTTTCAAGCTCACGCCCAAAGTCCCGACAACTGGAAGCAACACCAGCGCGCCAACAGCGGCCGGAGCACCAGCGGCGAAAACAAATATCGAATTCAGTTT
Protein: 358 (aa)
MAVLTSNNNSEAFLQNLAHIRNQRESTPANSSNNSGKNDEIVLLEKQGRSSQKLRSNNLAQISSTIGQNMNDISNIGSQPNESSKLPKILLPPRKDRQSSAPPSALPRPPKSLKPPRKIEYGRLSETDSNKSNSKSEYEMKTSSLKRHQSPVTSTGSKNFVDIKSELQMALNSTKNPPKNYGTIKSDTTNNITKIYYSNKPDYLSTKNYQRLPDSPSSDSQKRFVTSGKKITFMRQSPSSHQQQQAHQSREGSVSSGSNSRSSPKNEVTATYQPLTPRSRTRTPPKYLNLNPNVANGGKLNYMSHSNNNSPTKPNLPSSSVLHHTFQAHAQSPDNWKQHQRANSGRSTSGENKYRIQF
| Type | Start | End | Length |
| CDS |
27373 |
28191 |
819 |
| CDS |
28263 |
28517 |
255 |
| intron |
28192 |
28262 |
71 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001651541 |
hypothetical protein AaeL_AAEL005878 [Aedes aegypti] gb|EAT42594.1| conserved hypothetical protein [Aedes aegypti] |
2e-38 |
| Pfam |
PF07163.7 |
Pex26 protein |
9.5 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| C. quinquefasciatus |
CPIJ013884 |
| A. aegypti |
AAEL005878 |
| A. gambiae |
AGAP007536 |