MidgeBase gene description page [Pn.02381]
Outline
| Gene ID | Pn.02381 |
| Type | Protein coding gene |
| Scaffold | PnScaf2019 |
| Start | 59728 |
| End | 60701 |
| Direction | + |
Sequence
Transcript: 789 (bp)
ATGGCACTCACAGGACCAATTGGCAAAGAAACCTTGGATCTTAGTTTTCGACTTCACAGCAAAACTCAAGTTTTTGACGGCTCATCTAGCACACTTAGCAATGCCAAACTCAATTTGTGCGCATCAGCAAGTAGTTTTGGTCTCGTTTTTGTTGGATCATCTCTACCCGAAATTGTAGCAGTGTGTATGAAAGACCTTGAGTCGCCGACAATTGACTCGAATACACCAGTTCGTAAAATTCCGATGCCATCCGCCGTGACTCAACTCGCGACTAATTGCGATGGATCCATACTGGCTGTAGATGTCAAAGTTAATGGTGTTCCTCACATTCAACTTTACTCTGTTGCATCATTTTTGAGTCCTAATGTTCAAAAGCTTCGGGAATTCCAAGTTTCGAACGACAATACGTCCTCTCTACAGCTTTGCTGGAATCCAGTAATAAACTCCGTGCTCGCGGTTTGCACAGAGAATGGTGGGCTGTATTTATATCTGCTCAAAGATCGAGGTATCGACTTATATTCAATCGATCCGTCGCTCAAAGCCCAGTGCTGTTGTTGGTCACCGAAAGGCAAGCAAATTGTAGCTGGCTTCGCATACGGAAAGTTGATGCAGTTCAACATGGAGCTTAAACCGGCAAGGACTATCGAATGTCCACCGGGAATAATAAACGGAAGCTTTGATACAATCGCAATTCAATGGCTCTCAACATATCAGTTTGCTGTCGCACTACTAAGTCACGCTGAGGAATCAAGACCAGGAAATACGCTCACGTTCAAAGCAAAGCTGTAC
Protein: 263 (aa)
MALTGPIGKETLDLSFRLHSKTQVFDGSSSTLSNAKLNLCASASSFGLVFVGSSLPEIVAVCMKDLESPTIDSNTPVRKIPMPSAVTQLATNCDGSILAVDVKVNGVPHIQLYSVASFLSPNVQKLREFQVSNDNTSSLQLCWNPVINSVLAVCTENGGLYLYLLKDRGIDLYSIDPSLKAQCCCWSPKGKQIVAGFAYGKLMQFNMELKPARTIECPPGIINGSFDTIAIQWLSTYQFAVALLSHAEESRPGNTLTFKAKLY
| Type | Start | End | Length |
| CDS |
59728 |
59763 |
36 |
| CDS |
59829 |
60155 |
327 |
| CDS |
60217 |
60610 |
394 |
| CDS |
60667 |
60698 |
32 |
| intron |
59764 |
59828 |
65 |
| intron |
60156 |
60216 |
61 |
| intron |
60611 |
60666 |
56 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
EFR27998 |
hypothetical protein AND_04672 [Anopheles darlingi] |
1e-60 |
| InterPro |
IPR015943 |
WD40/YVTN repeat-like-containing domain |
|
| Gene Ontology(MF) |
GO:0005515 |
protein binding |
|
| Pfam |
PF00400.27 |
WD domain, G-beta repeat |
2 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| D. melanogaster |
FBgn0010660 |
| N. vitripennis |
NV11673-PA |
| H. melpomene |
HMEL008264-PA |
| S. invicta |
SI2.2.0_09057 |
| T. castaneum |
TC014339 |
| B. mori |
BGIBMGA007048-TA |
| D. plexippus |
DPOGS209269PA |
| C. quinquefasciatus |
CPIJ009141 |
| P. vanderplanki |
Pv.10326 |
| B. mori |
BGIBMGA007049-TA |
| A. mellifera |
GB17908-PA |
| A. aegypti |
AAEL014733 |
| P. humanus |
PHUM479060-PA |
| A. gambiae |
AGAP008970 |