MidgeBase gene description page [Pn.02271]
Outline
| Gene ID | Pn.02271 |
| Type | Protein coding gene |
| Scaffold | PnScaf1923 |
| Start | 538 |
| End | 854 |
| Direction | + |
Sequence
Transcript: 258 (bp)
ATGTTGTATGGAATTCTGCTCGGCTTGAACTGGATGTGGCCACCGATCTTCTTCGGATTTCGTTCGCTCAAATGGGGCTTTTTCGATATTGTGATGATGACACTAAGCGCGGCGGCCACTGGAATTTCCTTTTTTCGATTCAACAAACTTGCCGGATTTACTTTCGTTCCATTTGTTGCCTGGTTGAGCTTCGTGTCAGTCCTCAGCTACAGCAGTTATCGCCTCAACATGCCAGCCAGTGAGGGGAAGCAAAATAAT
Protein: 86 (aa)
MLYGILLGLNWMWPPIFFGFRSLKWGFFDIVMMTLSAAATGISFFRFNKLAGFTFVPFVAWLSFVSVLSYSSYRLNMPASEGKQNN
| Type | Start | End | Length |
| CDS |
538 |
612 |
75 |
| CDS |
669 |
851 |
183 |
| intron |
613 |
668 |
56 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
EFR28582 |
hypothetical protein AND_03309 [Anopheles darlingi] |
4e-17 |
| InterPro |
IPR004307 |
TspO/MBR-related protein |
|
| Gene Ontology(CC) |
GO:0016021 |
integral to membrane |
|
| Pfam |
PF06341.6 |
Protein of unknown function (DUF1056) |
0.02 |
| Pfam |
PF03073.10 |
TspO/MBR family |
8.8e-20 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes