MidgeBase gene description page [Pn.02221]
Outline
| Gene ID | Pn.02221 |
| Type | Protein coding gene |
| Scaffold | PnScaf1893 |
| Start | 37719 |
| End | 41204 |
| Direction | - |
Sequence
Transcript: 1986 (bp)
ATGTTTGTGAAGCGACGAAAGGTGTTAAACTTTAATAACAATGACATCTTGGAGAACCAAAATTACCCGATGAACAACGAAAATAACAATAAGAAAATCTTGCGAAAGTACTGCCTGCAACATAAGAATTGCGATGGAAATTCTAAAGAGTGTCTTCAAGTGGCAACCAACGTTACAGAACAGAAGCATCATGTAACGCGCGAGACTCGTGGACAGAATTTGGGCCTGTGCCGTGGCTTCCGCGGCTGCACCATCTGGTTGACTGGTCTCTCGGGTGCCGGCAAGACATCGATCGCATTCGAGCTCGAGGCGCTGCTCGTCTCGAAAGGCATCCCATCGTATGGCCTCGATGGCGACAACATCCGTACCGGCTTGAACAAGAACCTCGGCTTCACACAGGCCGATCGCGAGGAAAACATTCGCCGCGTCGCTGAAGTGGCAAAACTATTTGCCGACAGCGGCGTTGTCGCAATTTGCAGTTTTGTGTCGCCCTTCGCCGAAGATCGTGACATGGCTCGCAGAATTCACAAGGAAGCCGACCTCAAGTTTTATGAAATTTTCGTCGACACACCGCTCAACGTTTGCGAGTCGCGTGACGTAAAAGGTCTCTACAAGAAGGCACGTGAGGGTGCAATTCAAGGATTCACAGGTGTTACGCAAGCCTATGAGGCTCCCGAGAACCCCGACTTGATCGTCAGAACCGAAGGTATTACCATTCAGCAGTCGACTCAGCAGGTCATCGAACTGTTGGTTAAAGAAAATATCATCCCAAAGAGCATCACCGACATCTACGGAATAAAAGAGCTGTTCGTTCCAGAACACCGCAAGGCAGCAGCTGTCACAGAAGCTCAAACGCTTCCCACCTTAGAAATAAGCGAGGTTGAGCTGCAATGGCTGCAAGTGTTGAGCGAAGGCTGGGCCTCACCTCTCAGCGGCTTTATGCGCGAAAAAGATTATTTGCAAACTCTTCACTTCAATTGTATTGTAACAGACGACGGTTCGGTCGTTAATCATTCCGTGGCAATTGTTTTATCGCTATCAGAAAGTGATAAGAATCGCTTGAAAGATGCCAGTGCGCTAACATTGACTTTTGGCAAGAAGCCAGTCGCAATTCTCCGAAACCCCGAATTTTATTATCAGCGCAAAGAGGAACGATGTGGTCGCCAATTTGGCACAGCAAATCCTAATCACCCGTATATCAAAATGATAATGGAAAGTGGCGATTTCCTGGTCGGCGGTGATCTTGAAGTCTTCGAAAGAATCAAATGGAATGACGGCCTCGATGCGTATCGATTGACTCCTAACGAGATTCGCGCGAAGATTAAGGAAATGGGAGCAGATGCTGTGTTTGCTTTCCAATTGAGAAATCCCATTCATAACGGGCACGCGTTGCTGATGAAAGATTGCAAGCGACAGCTTCTGGAGCGCGGCTTCAAGAAACCAGTATTGCTTCTGCATCCTCTCGGCGGCTGGACCAAAGACGATGATGTGCCACTTCCTACCCGTATGGCACAGCATCAGGCCGTAATGGACGCAGGAATTTTGGATCGCGATGACACCATTCTTGCCATCTTCCCATCTCCCATGCTTTACGCGGGACCAACTGAAGTTCAATGGCACGCAAAGTCGCGCATGAATGCCGGCGCAAGCTGGTACATTGTCGGCCGAGATCCAGCAGGCATGCCGCATCCCGACAAACAAATGTACCCGGACGGCAACTTGTACGACGACACACACGGAAGCAGAGTTTTGAAGATGGCGCCTGGCTTAGATAACATTGTTATTCTGCCCTTCAAGGTTGCAGCTTACGATACCACTGTCAACGAAATGGCTTTCTTCGATCCGAAGCGCAAGGAAGACTTTTTGTTCATTTCTGGCACAAAGATGCGTGGATATGCTCGCAGCGGAGAGCTTCCACCGAAGGGCTTTATGGATGACAAGGCTTGGAATATTCTCGCAGAATATTATCAATCGCTTGCAAAGAAG
Protein: 662 (aa)
MFVKRRKVLNFNNNDILENQNYPMNNENNNKKILRKYCLQHKNCDGNSKECLQVATNVTEQKHHVTRETRGQNLGLCRGFRGCTIWLTGLSGAGKTSIAFELEALLVSKGIPSYGLDGDNIRTGLNKNLGFTQADREENIRRVAEVAKLFADSGVVAICSFVSPFAEDRDMARRIHKEADLKFYEIFVDTPLNVCESRDVKGLYKKAREGAIQGFTGVTQAYEAPENPDLIVRTEGITIQQSTQQVIELLVKENIIPKSITDIYGIKELFVPEHRKAAAVTEAQTLPTLEISEVELQWLQVLSEGWASPLSGFMREKDYLQTLHFNCIVTDDGSVVNHSVAIVLSLSESDKNRLKDASALTLTFGKKPVAILRNPEFYYQRKEERCGRQFGTANPNHPYIKMIMESGDFLVGGDLEVFERIKWNDGLDAYRLTPNEIRAKIKEMGADAVFAFQLRNPIHNGHALLMKDCKRQLLERGFKKPVLLLHPLGGWTKDDDVPLPTRMAQHQAVMDAGILDRDDTILAIFPSPMLYAGPTEVQWHAKSRMNAGASWYIVGRDPAGMPHPDKQMYPDGNLYDDTHGSRVLKMAPGLDNIVILPFKVAAYDTTVNEMAFFDPKRKEDFLFISGTKMRGYARSGELPPKGFMDDKAWNILAEYYQSLAKK
| Type | Start | End | Length |
| CDS |
37722 |
38029 |
308 |
| CDS |
38096 |
38981 |
886 |
| CDS |
39083 |
39601 |
519 |
| CDS |
39712 |
39834 |
123 |
| CDS |
41055 |
41204 |
150 |
| intron |
38030 |
38095 |
66 |
| intron |
38982 |
39082 |
101 |
| intron |
39602 |
39711 |
110 |
| intron |
39835 |
41054 |
1220 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_003435788 |
AGAP001256-PC [Anopheles gambiae str. PEST] gb|EGK97625.1| AGAP001256-PC [Anopheles gambiae str. PEST] |
0.0 |
| InterPro |
IPR014729 |
Rossmann-like alpha/beta/alpha sandwich fold |
|
| InterPro |
IPR015947 |
PUA-like domain |
|
| InterPro |
IPR025980 |
ATP-sulfurylase PUA-like domain |
|
| InterPro |
IPR024951 |
Sulphate adenylyltransferase catalytic domain |
|
| InterPro |
IPR002891 |
Adenylylsulphate kinase |
|
| InterPro |
IPR002650 |
Sulphate adenylyltransferase |
|
| Gene Ontology(BP) |
GO:0000103 |
sulfate assimilation |
|
| Gene Ontology(MF) |
GO:0005524 |
ATP binding |
|
| Gene Ontology(MF) |
GO:0004020 |
adenylylsulfate kinase activity |
|
| Gene Ontology(MF) |
GO:0004781 |
sulfate adenylyltransferase (ATP) activity |
|
| Pfam |
PF13671.1 |
AAA domain |
5.5e-06 |
| Pfam |
PF13207.1 |
AAA domain |
0.00017 |
| Pfam |
PF08433.5 |
Chromatin associated protein KTI12 |
0.02 |
| Pfam |
PF01583.15 |
Adenylylsulphate kinase |
1.3e-71 |
| Pfam |
PF01747.12 |
ATP-sulfurylase |
1.2e-65 |
| Pfam |
PF14306.1 |
PUA-like domain |
4.3e-44 |
| Pfam |
PF00485.13 |
Phosphoribulokinase / Uridine kinase family |
0.14 |
| Pfam |
PF13238.1 |
AAA domain |
0.00024 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| H. sapiens |
ENSP00000406157 |
| M. musculus |
ENSMUSG00000028032 |
| S. invicta |
SI2.2.0_15899 |
| D. plexippus |
DPOGS210128PA |
| A. gambiae |
AGAP001256 |
| B. mori |
BGIBMGA000234-TA |
| A. aegypti |
AAEL005605 |
| T. castaneum |
TC010318 |
| A. mellifera |
GB20024-PA |
| P. vanderplanki |
Pv.04305 |
| C. quinquefasciatus |
CPIJ006069 |
| D. melanogaster |
FBgn0020389 |
| N. vitripennis |
NV16164-PA |
| H. sapiens |
ENSP00000397123 |
| H. sapiens |
ENSP00000354436 |
| B. mori |
BGIBMGA000235-TA |
| P. humanus |
PHUM601270-PA |
| H. sapiens |
ENSP00000265174 |
| A. mellifera |
GB11122-PA |
| M. musculus |
ENSMUSG00000024899 |
| S. invicta |
SI2.2.0_13211 |
| H. melpomene |
HMEL007200-PA |