MidgeBase gene description page [Pn.02090]
Outline
| Gene ID | Pn.02090 |
| Type | Protein coding gene |
| Scaffold | PnScaf1822 |
| Start | 7375 |
| End | 8286 |
| Direction | + |
Sequence
Transcript: 909 (bp)
ATGTTGAGACGGCAAGCGAGACTTCGTCGAGAGTATCTTTATCGCAAAACAGCAGAGATAAAGCACAAAACTCTACAGGACAAAAAGGAGAGGATCAAGAAAAGTTTAGAAGATCACACAACCATTCACGGCGATTTGAGACGAGAGGCGCTGGATCTTCAGAAAAAGCTCAAATACACAGAAACATCTGAAGAGGCAACGAAAATTAACTCACAGGATGACGAGTATCGTTTTGCAGGCTGCGAGGATCCAAAAGTATTTATCACGACCTCGCACAACCCGTCGACGACTTTGAAGCAATTTGTGAAAGAACTCAGACTCTTAATTCCGAATGCACAGCGGGTCAACAGAGGAAACTACGACATCAAGCAGCTGGTGCATGCAAGCAGAGCAAACGACGCGACTGATTTGATCATCATTCACGAAACGCGCGGTGTTCCGACGAACTTGGTCATTTGCCATCTGCCTTACGGGCCAACCGCAAAGTTCAACATCTCAGGCATTGTCACGCGACACGAAATTCCAGACATCGGCAACATGCCCGAGGCGAAGCCGCACCTAATCTTCCACAACTTCACGACGAAGCTCGGCGAGAGGACGATGTCGATTCTCAAGTACCTCTTCCCGGTGCCGAAGGAAGACTCGAAACGAGTCATGACATTCGCCAACCATGACGACTATATCAGCTTCAGGCACCACTGCTACAGATACGTGAACGGGAATCTCGAGCTAACCGAGCTCGGTCCGCGCTTTCAGCTGAAGCTTTACCACATAATTTTGGGAACTGTCGACGAGGAGAAATCGGCCGACACCGAGTGGGTGCACCGACCATACATGAACACCGCTGCGAAGAGACGATTCCTCTCCGAGCAGGACGGCTGGAAGGAAGATGAGGTTGAGGTGGACAAC
Protein: 303 (aa)
MLRRQARLRREYLYRKTAEIKHKTLQDKKERIKKSLEDHTTIHGDLRREALDLQKKLKYTETSEEATKINSQDDEYRFAGCEDPKVFITTSHNPSTTLKQFVKELRLLIPNAQRVNRGNYDIKQLVHASRANDATDLIIIHETRGVPTNLVICHLPYGPTAKFNISGIVTRHEIPDIGNMPEAKPHLIFHNFTTKLGERTMSILKYLFPVPKEDSKRVMTFANHDDYISFRHHCYRYVNGNLELTELGPRFQLKLYHIILGTVDEEKSADTEWVHRPYMNTAAKRRFLSEQDGWKEDEVEVDN
| Type | Start | End | Length |
| CDS |
7375 |
8283 |
909 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
EFR21471 |
hypothetical protein AND_17009 [Anopheles darlingi] |
1e-132 |
| InterPro |
IPR007109 |
Brix domain |
|
| InterPro |
IPR004154 |
Anticodon-binding |
|
| Pfam |
PF00439.20 |
Bromodomain |
0.081 |
| Pfam |
PF04427.13 |
Brix domain |
2.1e-46 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| P. vanderplanki |
Pv.13774 |
| P. humanus |
PHUM569500-PA |
| H. sapiens |
ENSP00000259239 |
| D. plexippus |
DPOGS206285PA |
| D. melanogaster |
FBgn0039274 |
| N. vitripennis |
NV16861-PA |
| A. mellifera |
GB19131-PA |
| H. sapiens |
ENSP00000386411 |
| A. aegypti |
AAEL006063 |
| H. sapiens |
ENSP00000389701 |
| B. mori |
BGIBMGA010745-TA |
| D. plexippus |
DPOGS206286PA |
| M. musculus |
ENSMUSG00000026127 |
| S. invicta |
SI2.2.0_01837 |
| C. quinquefasciatus |
CPIJ003678 |
| A. gambiae |
AGAP003890 |
| H. sapiens |
ENSP00000386716 |
| H. melpomene |
HMEL016904-PA |
| T. castaneum |
TC012561 |
| H. sapiens |
ENSP00000409371 |