MidgeBase gene description page [Pn.01983]
Outline
| Gene ID | Pn.01983 |
| Type | Protein coding gene |
| Scaffold | PnScaf1749 |
| Start | 9972 |
| End | 12192 |
| Direction | + |
Sequence
Transcript: 1674 (bp)
ATGGCTGTGGAGCAAATCGTTCAGAGCAGCATCTTTGCATCGCCGCTCGTGATGCCGCTGTTGGCCATCGTCTTTGTGCTCACGGCCGTGCACTTTTGGCAGATGTCGCGACGTGAGAGGAAAATCGGTGACATGATTCCCGGGCCGCCGACCATTCCCATCGTTGGCAATGCTCACTACTTCTTGAATCACACAAATCACGAAATCTTCAACAAAGCCCTCGACATCATCAACTGCTACGGACACGTGGTGAGAGGATGGGTCGGCCACAAACTCCTCGTCGGTCTCTCAGATCCGCGCGACGTCGAGCTCATTCTCGGCAGCCACGTTCACATCGATAAATCAGACGAGTATCGTTTCTTCCAGCCATGGCTGGGCAACGGTCTTCTGATTTCGACAGGCGAAAAGTGGCGCACGCACAGAAAACTCATCGCACCCGCCTTCCACATGAACGTCCTTAAGAGCTTTATGAACACCTTCAACGACAACAGCCGTTTTGTGATCAAGAAGCTGATGAAGGAGGCCGGCAAGGAGTTTGACTGCCACGACTACATGAGCGAAGCGACCGTCGACATTCTGCTGGAAACTGCCATGGGATCGAAGAGAACGAGCGAGAGCGAGGAGGGCTTCAAGTATGCCATGGCTGTCATGAAGATGTGTGACATTCTCCACAAGCGGCAGTTCAAGATTTTCTCGCGCTTCGAGCCCTTCTTCACACTTACCGGCATGCGCGAGCAGCAGAAGAAACTGCTCGGCATCATCCACGGCATGACGCAGCGCGTCCTAAACGAGAAGAAGGAAATCTTCGACAGAAACCTCTCCGAGGGAAATTTGCCATCTCCTTCACTTCAGGAAATCATCAAGAGCGACGAGATGGTCGATCAGGCCGTGAAAAAGGCAAAGGCCAAGGCTCAGAAGGCGACCGGACTTCGCGACGATCTCGACGACATCGACGAGAATGACGTCGGCGAAAAGCGCAGACTTGCCTTCTTGGACCTCATGATTGAAACTTCGCACTACAATCCCTCGCAACTGTCCAAGGACGAGATCAAGCAGCAGGTCGACACGATCATGTTTGAGGGTCACGACACCACGGCCGCCGGCTCCTCGTTCACGCTCTGCATGCTCGGCTGCCATCCGGACGTGCAGGAGAAAGTCTACGCCGAGCAAAAGGCGATCTTTGGCGACTCCGACCGCGACTGCACCTTCGCCGACACCCTCGAGATGAAGTACTTGGAGCGCGTGATTTTCGAGACTCTGCGCTTGTACCCGCCGGTACCGTTGATCGCCCGCAAAATCAACCAGGATTTGAAACTCGCCTCGATCGACTCAGTCATTCCCGCCGGCACAACGATCATCATCGGCACCTTCAAGATCCATCGCCGACCCGACATCTACCCGAACCCCGAGAAATTCGACCCCGACAACTTCTTGCCCGAGAGAACCGCCAATCGTCACTACTACAGCTACATTCCTTTCAGCGCTGGTCCAAGATCGTGCGTGGGCCGCAAGTACGCCATGCTGAAGCTGAAGGTGCTGTTGAGCACAATCATCAGAAACTTCCACATCCACAGCACCGTGCCCGAGAAGGACTTCAAGCTGCAGGGTGACATCATCCTCAAGAGAACCGACGGCTTCCGCATCAAGTTGGAGCCGCGCAAGACAAAGGCCAAC
Protein: 558 (aa)
MAVEQIVQSSIFASPLVMPLLAIVFVLTAVHFWQMSRRERKIGDMIPGPPTIPIVGNAHYFLNHTNHEIFNKALDIINCYGHVVRGWVGHKLLVGLSDPRDVELILGSHVHIDKSDEYRFFQPWLGNGLLISTGEKWRTHRKLIAPAFHMNVLKSFMNTFNDNSRFVIKKLMKEAGKEFDCHDYMSEATVDILLETAMGSKRTSESEEGFKYAMAVMKMCDILHKRQFKIFSRFEPFFTLTGMREQQKKLLGIIHGMTQRVLNEKKEIFDRNLSEGNLPSPSLQEIIKSDEMVDQAVKKAKAKAQKATGLRDDLDDIDENDVGEKRRLAFLDLMIETSHYNPSQLSKDEIKQQVDTIMFEGHDTTAAGSSFTLCMLGCHPDVQEKVYAEQKAIFGDSDRDCTFADTLEMKYLERVIFETLRLYPPVPLIARKINQDLKLASIDSVIPAGTTIIIGTFKIHRRPDIYPNPEKFDPDNFLPERTANRHYYSYIPFSAGPRSCVGRKYAMLKLKVLLSTIIRNFHIHSTVPEKDFKLQGDIILKRTDGFRIKLEPRKTKAN
| Type | Start | End | Length |
| CDS |
9972 |
10173 |
202 |
| CDS |
10448 |
10898 |
451 |
| CDS |
11024 |
11863 |
840 |
| CDS |
12009 |
12189 |
181 |
| intron |
10174 |
10447 |
274 |
| intron |
10899 |
11023 |
125 |
| intron |
11864 |
12008 |
145 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
AAW78325 |
cytochrome P450 family 4 [Chironomus tentans] |
0.0 |
| InterPro |
IPR001128 |
Cytochrome P450 |
|
| InterPro |
IPR002401 |
Cytochrome P450, E-class, group I |
|
| InterPro |
IPR017972 |
Cytochrome P450, conserved site |
|
| Gene Ontology(BP) |
GO:0055114 |
oxidation-reduction process |
|
| Gene Ontology(MF) |
GO:0009055 |
electron carrier activity |
|
| Gene Ontology(MF) |
GO:0020037 |
heme binding |
|
| Gene Ontology(MF) |
GO:0016705 |
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
|
| Gene Ontology(MF) |
GO:0005506 |
iron ion binding |
|
| Pfam |
PF11284.3 |
Protein of unknown function (DUF3085) |
0.048 |
| Pfam |
PF00067.17 |
Cytochrome P450 |
1.1e-103 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
| Gene ID |
| Pn.00856 |
| Pn.01982 |
Orthologous genes
| Species |
Gene ID |
| P. vanderplanki |
Pv.09039 |
| D. melanogaster |
FBgn0030304 |
| D. plexippus |
DPOGS205654PA |
| S. invicta |
SI2.2.0_09253 |
| D. melanogaster |
FBgn0010019 |
| C. quinquefasciatus |
CPIJ800253 |
| P. vanderplanki |
Pv.00551 |
| B. mori |
BGIBMGA001004-TA |
| N. vitripennis |
NV14333-PA |
| A. aegypti |
AAEL004054 |
| A. aegypti |
AAEL008345 |
| P. humanus |
PHUM063470-PA |
| A. aegypti |
AAEL006824 |
| C. quinquefasciatus |
CPIJ018668 |
| A. mellifera |
GB11973-PA |
| A. gambiae |
AGAP000877 |
| N. vitripennis |
NV16242-PA |
| B. mori |
BGIBMGA001162-TA |
| B. mori |
BGIBMGA001005-TA |
| T. castaneum |
TC007061 |
| H. melpomene |
HMEL016705-PA |
| A. gambiae |
AGAP001076 |
| P. vanderplanki |
Pv.00550 |
| H. melpomene |
HMEL006588-PA |
| T. castaneum |
TC008058 |
| B. mori |
BGIBMGA001003-TA |
| D. plexippus |
DPOGS211931PA |
| S. invicta |
SI2.2.0_09298 |