MidgeBase gene description page [Pn.01942]
Outline
| Gene ID | Pn.01942 |
| Type | Protein coding gene |
| Scaffold | PnScaf1701 |
| Start | 3001 |
| End | 4821 |
| Direction | + |
Sequence
Transcript: 1590 (bp)
ATGATAACAGAAACGCTCGTGTTCGTCCTAATTTTTGTCGCCGCAAAGTATTCCTTGAGAAATCTCGAGAGCGTGTCTCGCTTTCCCCGAAAATGGAAGCGAACTTTCGAACTGGCCAGCGAGTTTCCCACCAGCAAGATGCGCATCACCTTCTCCAACGTTTGGGAGTATCTCAACTGCGACACGCACATCATCTACAAGAGATTCATCGAGCAAATAAGCGACGAAGCGCTCACGAAGGCATGGTTCGGTCCGAAGCTGGCCATTCTCATCGACTCGCCCGCGGACGCCAAAATCGTCTTCAACTCGAAGGATTGCATCGACAAGCCGCTCTACCAGAAGGAAGCGGCCAGGCTCACGCAGGGCACGGTGTTTGGGCACGTTGAGCCGTGGCGGTCGCACCGGAAAATCCTCAACCCATTCTTCGGCAACAAAGCGCTCATTAACACGGTCGTCCCGATTTTTAACGCAAAGGTGAAGATTTTTATGGAGAAAATTAGAAGCAAGGAGGGCATGGGTGAGTTCAACGTGTTTCACGAACTGGCAGCGCTCACGCTCGAGATAGTTTTGTCGGCCATGGAGTTGGACGTCGACATTCAGAGCCTCGACAACAAGAAGCGCAGTGCCTATGTCAAAAATCTAGAAAAATATTTCGAGTTAGTCACCATCCGCTGCTTCAGGGTTTGGCTGCACATCAACGTTATCTTCAGGTTTTCGAGCATTCGTCGCGAGCAAGAGGAGGCCATGAGTCAGTCAGCGATGGCTTTTTCGCCCAGTATCATCGCAAATGCCCGCGCGAAACTCGACGATTCCAACAACAACAAAATAAACAGCAACAACAACAATGAAAACAACAACAGCATTGAAAATGCAAAGATCGACGATGAGAAGCCTCATACTAAGCACAAGACGTTCATTCGAGTTCTGGTTGATCCGAAAAATGGCTTCAACGACGCCGAAATCGAGGATGAGATTAGCACGCTGCTCATCGCAGCGCAGGACACTTCGGCAAATGCCGCCTCCTCCACTCTGCTGCTGCTCGCGATGCACAAGGAAGTTCAGGCGAAGGTCGTCGCAGAGCTGCACGAGGTGCTCGGAAATTCGCAAAACTTCATCGAGTTGGACGTCGAGCAGCTCAACCGACTCACCTACCTCGAGATGGTCATAAACGAGGCGATGCGCCTCATGCCGGTCGTTCCCTTCATTCTCCGTACAAACGACAATGAAGTCGCTCTCAGCGAGGGCCAGCGCATTCCGATCGGCTCAACCATCTTCATTCCGATCGTGAAAATCCTCAAGAACAAGAAGTTTTGGGGCGAGGACGCGGAGGAGTTCAAGCCCGAGCGCTTTGCGAAGGAAAGTTTCGAGAAAATCCATCCTTACGCCTTCATTCCGTTCGCGAAGGGCCCGCGAATGTGCATCGGGTGGCGGTATGCGATGTTCTTGATAAAAATCAAGCTGGCCAACTTTCTGCTGCGCTACGAAGTCGACACGACGCTGAAACTCAGCGAGCTGGAGTTCGGAGTCAACATCACGATGACCGTGTGCCAAGGCCACATGATTAGCATCAAGAAGAGGAGCGAAAGCGCA
Protein: 530 (aa)
MITETLVFVLIFVAAKYSLRNLESVSRFPRKWKRTFELASEFPTSKMRITFSNVWEYLNCDTHIIYKRFIEQISDEALTKAWFGPKLAILIDSPADAKIVFNSKDCIDKPLYQKEAARLTQGTVFGHVEPWRSHRKILNPFFGNKALINTVVPIFNAKVKIFMEKIRSKEGMGEFNVFHELAALTLEIVLSAMELDVDIQSLDNKKRSAYVKNLEKYFELVTIRCFRVWLHINVIFRFSSIRREQEEAMSQSAMAFSPSIIANARAKLDDSNNNKINSNNNNENNNSIENAKIDDEKPHTKHKTFIRVLVDPKNGFNDAEIEDEISTLLIAAQDTSANAASSTLLLLAMHKEVQAKVVAELHEVLGNSQNFIELDVEQLNRLTYLEMVINEAMRLMPVVPFILRTNDNEVALSEGQRIPIGSTIFIPIVKILKNKKFWGEDAEEFKPERFAKESFEKIHPYAFIPFAKGPRMCIGWRYAMFLIKIKLANFLLRYEVDTTLKLSELEFGVNITMTVCQGHMISIKKRSESA
| Type | Start | End | Length |
| CDS |
3001 |
3647 |
647 |
| CDS |
3876 |
4818 |
943 |
| intron |
3648 |
3875 |
228 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001662870 |
cytochrome P450 [Aedes aegypti] gb|EAT35039.1| cytochrome P450 [Aedes aegypti] |
4e-68 |
| InterPro |
IPR001128 |
Cytochrome P450 |
|
| InterPro |
IPR002401 |
Cytochrome P450, E-class, group I |
|
| Gene Ontology(BP) |
GO:0055114 |
oxidation-reduction process |
|
| Gene Ontology(MF) |
GO:0009055 |
electron carrier activity |
|
| Gene Ontology(MF) |
GO:0020037 |
heme binding |
|
| Gene Ontology(MF) |
GO:0016705 |
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
|
| Gene Ontology(MF) |
GO:0005506 |
iron ion binding |
|
| Pfam |
PF00067.17 |
Cytochrome P450 |
4e-72 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
| Gene ID |
| Pn.01941 |
| Pn.01943 |
Orthologous genes
| Species |
Gene ID |
| A. gambiae |
AGAP002138 |
| C. quinquefasciatus |
CPIJ800295 |
| A. gambiae |
AGAP001443 |
| P. vanderplanki |
Pv.01586 |
| C. quinquefasciatus |
CPIJ015963 |
| C. quinquefasciatus |
CPIJ800294 |
| P. vanderplanki |
Pv.01585 |
| C. quinquefasciatus |
CPIJ015962 |
| A. aegypti |
AAEL000340 |
| P. vanderplanki |
Pv.01584 |
| A. aegypti |
AAEL011770 |
| P. vanderplanki |
Pv.05861 |