MidgeBase gene description page [Pn.01936]
Outline
| Gene ID | Pn.01936 |
| Type | Protein coding gene |
| Scaffold | PnScaf1698 |
| Start | 7502 |
| End | 9077 |
| Direction | + |
Sequence
Transcript: 1362 (bp)
ATGCGAATGCCGCAAGTGTTGGTAAAAAGATCGACAAGCGTCGAGTCATCGGTCAAGCTGATGCAGCGCCATCTTCTGCAAATCGCTGATCGCATCCCCAACGACATCCTCTTAACCCTGTTGAAGTGCTTTGCGCAGCTTTTGACATGCGAGTCAGAGCCTGCGCCAAAGGTCTCGGGTCCCTTTATCAGGGCGTTTGCGAAGATTCGCGACGATGAGAGCGCAAAACAATTTTCCGCAATTGCCGAAGAAGACGAGAAGGAAAAGGAGATTAGCGATGAGGACAGCAACGAGTGTACGTTCAATTATAAAATCACCAACGTTGTTACCCAGGAAGTTTTGTACTCAATGAATAATGTTGCGGAGAAAGATGAAAACGAAAATGATGGCGATGGCAACAGCAATATTAACAATAACGACAGCGAAGATCAAGAGGCAGTCGAATCTGTGGCGATAATTGACGCAGTTGAAGCGGAAAGAGAAGAATTGGACGGAGATAAAAATAATGAGAGCAACAATGACGAGCGTGCTGACAATGATGCAGAAAGAGAGAAAAACGAAGAAGAAGACACTGCTGTAAACACGAACGAGGAGCCAGAATTGTTGGAAACAATTCAAGAGATTGATCAGCAGAATTCGGAGAACGAAGAGACTATCAATGAGACCATCGATGACGATGAGAACAATGATGGCACTGCCGCAGAAAATATTGATGATTCTATTGAAAATGACAAAATAGAAGAGGAGAATGAGGCAATAATAAAAGATGAGTCATTGGACGAGAATCAACCGCAAGCCGATGAAGGCGAGTCCATTCAACCTATCGAAAAAGTCTCCTTGGATGACATTCAGCGCGAAATCCAAGAAATGCAAATGTTTCTGTTAAACAAAGGTGTCGCACCGGAAAATAAAAGTTGCCTTGGCCAAAACACCAACAACAGCAGCAACAGCAACATTAACAGGCCAGAGTTGGTGACGGAAAAAACGAAAGCAAAGTTGGAAGACGCCTATAACGTGGACGTGTGCATAAACTTGAAGAAGAAAGGCGGTGAAAGGAGGCCCACGAAATCGAAGGCAATCTTATCAAATTACATAAATGAGAATTCGCGTGCAAAGTATACAAGGGGTGACGCGGAGCGTAATGGCCATATCTTTGGCCACATCTCGGCCGTACCGAACACGCCGGAAGACTTCTTGAAGGAGAAGTCTGTTGCCGAGAAGATTAACAAGAAGAAGCAAAAGATCAAGCATCTCGACATGTCGTGGCAGAAGCTCTGTGACGACCAGAGAAAAGTTTATAAACACTCGAACTTTAAGTCTCCAGTCGACGGTAAATGGATAATCGACGAGCAGAAGAATATC
Protein: 454 (aa)
MRMPQVLVKRSTSVESSVKLMQRHLLQIADRIPNDILLTLLKCFAQLLTCESEPAPKVSGPFIRAFAKIRDDESAKQFSAIAEEDEKEKEISDEDSNECTFNYKITNVVTQEVLYSMNNVAEKDENENDGDGNSNINNNDSEDQEAVESVAIIDAVEAEREELDGDKNNESNNDERADNDAEREKNEEEDTAVNTNEEPELLETIQEIDQQNSENEETINETIDDDENNDGTAAENIDDSIENDKIEEENEAIIKDESLDENQPQADEGESIQPIEKVSLDDIQREIQEMQMFLLNKGVAPENKSCLGQNTNNSSNSNINRPELVTEKTKAKLEDAYNVDVCINLKKKGGERRPTKSKAILSNYINENSRAKYTRGDAERNGHIFGHISAVPNTPEDFLKEKSVAEKINKKKQKIKHLDMSWQKLCDDQRKVYKHSNFKSPVDGKWIIDEQKNI
| Type | Start | End | Length |
| CDS |
7502 |
7529 |
28 |
| CDS |
7660 |
8932 |
1273 |
| CDS |
9014 |
9074 |
61 |
| intron |
7530 |
7659 |
130 |
| intron |
8933 |
9013 |
81 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
NA |
No hit found |
NA |
| Pfam |
PF03344.10 |
Daxx Family |
5.2 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes