MidgeBase gene description page [Pn.01820]
Outline
| Gene ID | Pn.01820 |
| Type | Protein coding gene |
| Scaffold | PnScaf1609 |
| Start | 3044 |
| End | 9126 |
| Direction | + |
Sequence
Transcript: 834 (bp)
ATGCTCAATGGCAACACGGAATTCGTCTTTGCTCTCTCGGAAAGGACGATGTGGTGCCTAAAGCAAATCGCTCTCATTTCGCTCTACGTAATTAGCTCTTGCGAGTCGGGGAAGATCAAGAAGTTCGGCATTGTCGGCGGCGAGGAGACGTCGATAAGCAACTTTCCATACCAGGTCGCCTATCTAGTCAGCGGCAAGCTCAAATGCGGCGCCAGCATTATTTCGAGTAATTGTGTTTTGACTGCAGGCCACTGCGTCAACAATTTCAAGACAAACGTCACCGTTCGTGTCGGCTCCAGTCACAAGGAGCGCGACGGCACGGTGCATGCTGTGAAGCAGATCATCAATCATCCGTCGTTCAATCCGGTAAAGCTCTACAATGACATCGCCATTCTGGTGCTGCAGGACGACATCATGTTTGATGCGACCACAAAGCCGATCGCGCTGCCCATGAAGAACCAAGTCATTCCCGACGGCACTATGTGCACCGTGTCTGGATGGGGTAAAATGGATAAGGATCTGAAGCCGGATATTTTGCGCTCCGTTGACGTGAAAATGGTGAACCGGGAAGTCTGTCAGCAGAGCTACAACACGACGCACGTGAAGTTCAAAATAACCGAGGAGATGGTTTGCGCTGGCTATCTCGAGGGCGGTCGTGATGCATGCACAGGCGACTCGGGCGGTCCATTGACGTGCGTTATTAATGGAAAACGAATCCAAGCAGGCGTCGTGTCCTCAGGGTATGGCTGTGCTCTACAGGGCTTCCCGGGAATTTATTCGGAAGTGGCCAAGTTCAGAGATTGGATCGAAGAGAAATGCGTCCTGCCGAAGAGT
Protein: 278 (aa)
MLNGNTEFVFALSERTMWCLKQIALISLYVISSCESGKIKKFGIVGGEETSISNFPYQVAYLVSGKLKCGASIISSNCVLTAGHCVNNFKTNVTVRVGSSHKERDGTVHAVKQIINHPSFNPVKLYNDIAILVLQDDIMFDATTKPIALPMKNQVIPDGTMCTVSGWGKMDKDLKPDILRSVDVKMVNREVCQQSYNTTHVKFKITEEMVCAGYLEGGRDACTGDSGGPLTCVINGKRIQAGVVSSGYGCALQGFPGIYSEVAKFRDWIEEKCVLPKS
| Type | Start | End | Length |
| CDS |
3044 |
3064 |
21 |
| CDS |
7613 |
7838 |
226 |
| CDS |
7916 |
8170 |
255 |
| CDS |
8450 |
8617 |
168 |
| CDS |
8681 |
8688 |
8 |
| CDS |
8871 |
8931 |
61 |
| CDS |
9029 |
9123 |
95 |
| intron |
3065 |
7612 |
4548 |
| intron |
7839 |
7915 |
77 |
| intron |
8171 |
8449 |
279 |
| intron |
8618 |
8680 |
63 |
| intron |
8689 |
8870 |
182 |
| intron |
8932 |
9028 |
97 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
NP_001166051 |
serine protease 11 precursor [Nasonia vitripennis] |
1e-48 |
| InterPro |
IPR009003 |
Peptidase cysteine/serine, trypsin-like |
|
| InterPro |
IPR001314 |
Peptidase S1A, chymotrypsin-type |
|
| InterPro |
IPR001254 |
Peptidase S1/S6, chymotrypsin/Hap |
|
| InterPro |
IPR018114 |
Peptidase S1/S6, chymotrypsin/Hap, active site |
|
| Gene Ontology(BP) |
GO:0006508 |
proteolysis |
|
| Gene Ontology(MF) |
GO:0004252 |
serine-type endopeptidase activity |
|
| Gene Ontology(MF) |
GO:0003824 |
catalytic activity |
|
| Pfam |
PF03761.10 |
Domain of unknown function (DUF316) |
0.0075 |
| Pfam |
PF09342.6 |
Domain of unknown function (DUF1986) |
0.0045 |
| Pfam |
PF13365.1 |
Trypsin-like peptidase domain |
0.18 |
| Pfam |
PF00089.21 |
Trypsin |
2.1e-64 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| N. vitripennis |
NV50227-PA |
| H. sapiens |
ENSP00000411013 |
| N. vitripennis |
NV14773-PA |
| P. vanderplanki |
Pv.11891 |
| H. sapiens |
ENSP00000381442 |
| H. sapiens |
ENSP00000369762 |
| N. vitripennis |
NV14775-PA |
| N. vitripennis |
NV14774-PA |
| P. vanderplanki |
Pv.12585 |
| N. vitripennis |
NV14776-PA |
| M. musculus |
ENSMUSG00000024034 |
| H. sapiens |
ENSP00000291532 |
| H. sapiens |
ENSP00000381434 |
| N. vitripennis |
NV14777-PA |