MidgeBase gene description page [Pn.01755]
Outline
| Gene ID | Pn.01755 |
| Type | Protein coding gene |
| Scaffold | PnScaf1573 |
| Start | 7352 |
| End | 8551 |
| Direction | - |
Sequence
Transcript: 402 (bp)
ATGTTTATTTTTGTTCCACACAACTTTGGAGCAGAGGAAGATAAGTGCTGCAGAAGCCACGATAATTGTTATCCTCAAATTTCACCCGGCGAGTGCTTGAAAAGCATTTGCAATAAGGGCAGCTTTACGAGATTGCATTGTGATTGCGACGAGAAATTTCGGAGGTGTCTGAGCACTCTGAACACTGACATAGGAAACACGCTGGGTGCTGCTTTTTTCAACGCTGTACAAGTGACATGCTTCGACTATCGCCGACCTTGCAGTTCACATCAGAGAGTCGGCTTCAATGAGAGCGAACAAGAAGAAATATGCTCACGATATAAGTTTCGGCCTTCAATGAAGTACCATGGACGTCCGACTACCGGCAACTTACAGAACGGTGTGAAGAGACCTCATTTAATT
Protein: 134 (aa)
MFIFVPHNFGAEEDKCCRSHDNCYPQISPGECLKSICNKGSFTRLHCDCDEKFRRCLSTLNTDIGNTLGAAFFNAVQVTCFDYRRPCSSHQRVGFNESEQEEICSRYKFRPSMKYHGRPTTGNLQNGVKRPHLI
| Type | Start | End | Length |
| CDS |
7355 |
7481 |
127 |
| CDS |
8140 |
8221 |
82 |
| CDS |
8283 |
8422 |
140 |
| CDS |
8499 |
8551 |
53 |
| intron |
7482 |
8139 |
658 |
| intron |
8222 |
8282 |
61 |
| intron |
8423 |
8498 |
76 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_318096 |
AGAP004731-PA [Anopheles gambiae str. PEST] gb|EAA13171.5| AGAP004731-PA [Anopheles gambiae str. PEST] |
9e-36 |
| InterPro |
IPR013090 |
Phospholipase A2, active site |
|
| InterPro |
IPR016090 |
Phospholipase A2 |
|
| InterPro |
IPR001211 |
Phospholipase A2, eukaryotic |
|
| Gene Ontology(BP) |
GO:0016042 |
lipid catabolic process |
|
| Gene Ontology(BP) |
GO:0006644 |
phospholipid metabolic process |
|
| Gene Ontology(MF) |
GO:0005509 |
calcium ion binding |
|
| Gene Ontology(MF) |
GO:0004623 |
phospholipase A2 activity |
|
| Pfam |
PF06951.6 |
Group XII secretory phospholipase A2 precursor (PLA2G12) |
0.022 |
| Pfam |
PF05826.7 |
Phospholipase A2 |
8.8e-23 |
| Pfam |
PF05535.7 |
Chromadorea ALT protein |
0.005 |
| Pfam |
PF00068.14 |
Phospholipase A2 |
0.11 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| A. gambiae |
AGAP004731 |
| S. invicta |
SI2.2.0_12161 |
| T. castaneum |
TC015181 |
| P. humanus |
PHUM448360-PA |
| D. melanogaster |
FBgn0029720 |
| C. quinquefasciatus |
CPIJ002502 |
| A. aegypti |
AAEL009679 |
| P. vanderplanki |
Pv.07593 |
| N. vitripennis |
NV11861-PA |
| A. mellifera |
GB12857-PA |