MidgeBase gene description page [Pn.01692]
Outline
| Gene ID | Pn.01692 |
| Type | Protein coding gene |
| Scaffold | PnScaf1513 |
| Start | 40717 |
| End | 42338 |
| Direction | + |
Sequence
Transcript: 1245 (bp)
ATGGCTCTTAACAAACTCAGCATCGAAAACTTGGATTTGGCTGGCAAGCGCGTGCTGATGCGCGTTGACTTCAACGTCCCAATCAAGGAAGGAAAAATTACCAGCAACCAGCGTATCGTCGCTGCTTTAGAGTCAATTAAATACGCTTTGGACAAGGGAGCCAAGTCGGTCGTCTTGTGCTCACATCTCGGACGACCTGATGGAAACAAAAACCCAAAATACACAATGGCCCCTGTCGCTGATGAGTTGAAGAAGCTCTTGGGCAAGGACGTTAAATTCCTCAACGATTGCGTTGGTGCTGAAGTTGAAGCTGCCTGTGCTGACCCAGCTCCTGGTTCAGTTATTCTGCTTGAAAACCTCCGCTTCTACATTGAAGAGGAGGGCAAGGGCGTCGATGCTGCCGGTGCCAAAGTAAAGGCTAATCCTGATAAGGTCAAGGAATTCCGTGCCAGCCTCGCGAAGCTCGGAGACGTCTACATTAATGATGCATTTGGAACAGCTCATCGTGCTCACTCCTCGATGATGGGCGAAGGCTACTCACAACGTGCTGCTGGCTTTTTGATGAACAAGGAATTGCGCTACTTCTCAAAGGCCCTCGACAACCCAGCTCGCCCATTCTTGGCTATTTTGGGCGGCGCAAAGGTCGCCGACAAGATTCAGCTGATCGAAAACCTGTTGGACAAGGTCAACGAAATGATAATTGGCGGTGGTATGGCATTCACTTTCCTGAAAGTTTTGAACAACATGGAAATCGGCGGCTCGCTGTTTGACGAGGAGGGCTCGAAGATTGTCAAAAACCTCGTTGAGAAGGCAAAGAAGAACAATGTTCAATTGCATTTGCCAGTCGACTTCGTCACAGGCTCGAAATTCGGCGAAGATGCCGAGGTCGGCGAGGCTTCAGTCGAGAGCGGAATCCCAGCTGGCTGGATGGGACTCGATGTTGGTCCAAAGACTCGCGACCTCTTTGCTGCGCCAGTTGCTCGCGCAAAGGTCATTGTCTGGAACGGACCGTGTGGCGTTTTTGAGTTCCCGAACTTTGCTAAAGGCACAAAGTCGCTCATGGATGCCGTCGTCGATGTAACTTCGAAGGGAGCCATCACGATCATTGGCGGCGGAGACACTGCCAGTTGCTGCGCCAAGTGGGGAACTGAGTCGAAGGTTTCGCACGTGTCGACCGGTGGCGGTGCGAGCTTGGAACTGCTCGAAGGAAAGACCTTGCCCGGTGTCGCTGCATTATCAAATGCC
Protein: 415 (aa)
MALNKLSIENLDLAGKRVLMRVDFNVPIKEGKITSNQRIVAALESIKYALDKGAKSVVLCSHLGRPDGNKNPKYTMAPVADELKKLLGKDVKFLNDCVGAEVEAACADPAPGSVILLENLRFYIEEEGKGVDAAGAKVKANPDKVKEFRASLAKLGDVYINDAFGTAHRAHSSMMGEGYSQRAAGFLMNKELRYFSKALDNPARPFLAILGGAKVADKIQLIENLLDKVNEMIIGGGMAFTFLKVLNNMEIGGSLFDEEGSKIVKNLVEKAKKNNVQLHLPVDFVTGSKFGEDAEVGEASVESGIPAGWMGLDVGPKTRDLFAAPVARAKVIVWNGPCGVFEFPNFAKGTKSLMDAVVDVTSKGAITIIGGGDTASCCAKWGTESKVSHVSTGGGASLELLEGKTLPGVAALSNA
| Type | Start | End | Length |
| CDS |
40717 |
40778 |
62 |
| CDS |
40877 |
40985 |
109 |
| CDS |
41262 |
42335 |
1074 |
| intron |
40779 |
40876 |
98 |
| intron |
40986 |
41261 |
276 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001355994 |
GA16139 [Drosophila pseudoobscura pseudoobscura] ref|XP_002021559.1| GL26449 [Drosophila persimilis] gb|EAL33054.1| GA16139 [Drosophila pseudoobscura pseudoobscura] gb|EDW25402.1| GL26449 [Drosophila persimilis] |
0.0 |
| InterPro |
IPR015824 |
Phosphoglycerate kinase, N-terminal |
|
| InterPro |
IPR001576 |
Phosphoglycerate kinase |
|
| InterPro |
IPR015901 |
Phosphoglycerate kinase, C-terminal |
|
| InterPro |
IPR015911 |
Phosphoglycerate kinase, conserved site |
|
| Gene Ontology(BP) |
GO:0006096 |
glycolysis |
|
| Gene Ontology(MF) |
GO:0004618 |
phosphoglycerate kinase activity |
|
| Pfam |
PF00162.14 |
Phosphoglycerate kinase |
3.2e-151 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| M. musculus |
ENSMUSG00000031233 |
| H. sapiens |
ENSP00000444708 |
| B. mori |
BGIBMGA007681-TA |
| T. castaneum |
TC015540 |
| C. quinquefasciatus |
CPIJ009280 |
| A. gambiae |
AGAP008802 |
| D. melanogaster |
FBgn0250906 |
| P. vanderplanki |
Pv.08753 |
| A. aegypti |
AAEL004988 |
| N. vitripennis |
NV10148-PA |
| A. mellifera |
GB11056-PA |
| S. invicta |
SI2.2.0_08663 |
| H. sapiens |
ENSP00000305995 |
| H. melpomene |
HMEL010361-PA |
| D. melanogaster |
FBgn0031451 |
| P. humanus |
PHUM368610-PA |
| H. sapiens |
ENSP00000362413 |
| M. musculus |
ENSMUSG00000062070 |
| M. musculus |
ENSMUSG00000066632 |
| D. plexippus |
DPOGS213064PA |